Lotus japonicus: 130711613
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Entry
130711613 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130711613 isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
lja
Lotus japonicus
Pathway
lja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130711613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130711613
DNA repair and recombination proteins [BR:
lja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
130711613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
YscJ_FliF
MutS_III
Motif
Other DBs
NCBI-GeneID:
130711613
NCBI-ProteinID:
XP_057417285
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Position
4:complement(6679647..6685083)
Genome browser
AA seq
904 aa
AA seq
DB search
MQLSSCNLLFIPAKNPPRFSFKPCFCFNHNSAESNSLQAETLKTLEWSSICKHLSAFTST
SMGSSAANAARLPIGRTPQESQKLLDQTSAARLVTHPPDFTGIHDLTEILTVAVSGQLLT
IPELCTVRRTLTAARELFHNLKHLASASSNPQRYIPLLEILRNCNFQLDLERKIGFCVDC
KLSVILDRASEDLEIIRSERRRNLENLDSLLKEASSQIFRAGGIDRPLITKRRSRMCVGV
RASHRYLLPNGVVLNVSSSGATYFMEPKDAIDLNNMEVRLSNSEKAEERAILSMLASEIA
NSESEINYLLDRILEVDLAFARAAYAGWMNGVCPIFSLGNFEGCDSVEEDDDLTVNIDGV
RHPLLLESSLEKNSDNLTRSGNVAKLGNGNGAVASTNRPQGLSDFPVPVDFKIRHGTRVV
VISGPNTGGKTASMKTLGLVSLMSKAGMHLPAKNSPKLPWFDLILADIGDHQSLEQNLST
FSGHISRICKFLEVASKQSLVLIDEIGSGTDPSEGVALSTSILQYLKDHVNLAVVTTHYA
DLSNLKEKDTSFDNAAMEFSLETLEPTYRILWGCTGDSNALSIAQSIGFDRNVINHAQKW
VEKLKPEQQQERRGILYQSLQEERNRLKAQAEKAAYIHKEIMDVYREIQGEAEDLDRREM
ELMAKETQQVQQELEDAKSQMETTIQKFEKELRVSGRDKLNSLIRESESVIASIVKSHTP
PDSFPVSEADHGSYAPQFGDQVRVKGLGGKLATVVELPGDDEAILVQYGKVKVRVKKSSI
IAIPSSAKNAVTSSSTNQGRQSLQKAQHRGNLDVNSNDDLPYGPVVRTSKNTVDLRGMRV
EEASIHLEMAINASRPYSVLFVIHGMGTGAIKERALEILQSHARVSNYEPENPMNYGCTI
AYVK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcagcagctgcaacctcctcttcattccggcgaagaaccccccacggttttca
ttcaaaccctgcttctgcttcaaccataactcggccgagtcaaactcactccaagccgag
accctcaagacactggaatggagctccatatgcaagcacctctctgcattcacctccacc
tccatgggctcctccgccgccaacgccgcccgtttgcccatcggacggacccctcaggag
agccagaagcttctcgaccagacttccgccgccagactcgtcactcatccgcctgacttc
accggaatccatgacttgacggagattctcactgttgctgtctccggtcagctgctaacc
atcccggagctttgcaccgttcgccgcacgcttactgccgccagagaattgttccacaat
ttgaaacacttggcttctgcttctagtaatccacaaaggtacataccccttcttgaaata
ctgcgtaattgtaattttcaactggacttggagcgtaaaataggattttgcgtagattgc
aagctttcagtaattcttgatagagcaagtgaagacctggagatcattagatcagaaaga
aggaggaacctagaaaatttggattctttattgaaggaagcatcatctcaaatcttccgg
gctgggggcattgacagaccattaataactaagcgtcgatctagaatgtgtgtcggtgtt
agggcttcccatagatacttgcttccaaatggggttgttctgaatgttagcagttctgga
gcaacatactttatggaacccaaagacgcaatagatctgaacaacatggaagttaggctt
tcgaactccgagaaggctgaggaaagagctatcttgagtatgcttgcatctgaaatagca
aattcagaatcagagataaactatttattggatagaattcttgaggttgatctcgctttt
gcaagagctgcctatgctggatggatgaatggggtgtgtccaatttttagtttaggtaat
tttgaaggctgtgattcagttgaagaggatgatgatttaacagtaaatattgatggtgta
cgacatccattacttctggagtcctccctagaaaaaaattcagataatcttacaagatct
ggaaatgttgcgaagttggggaatggaaacggagcagtggcttctacaaatagaccacaa
ggcttatcagacttccctgtgccagttgactttaaaattagacatggaactagagtggtg
gtgatctcaggacctaatactggagggaaaactgcttccatgaaaacattgggcctggtg
tcacttatgtcaaaggctggaatgcacctgcctgccaagaacagtccaaaacttccttgg
tttgaccttatccttgcagatattggagatcatcagtcccttgaacaaaacctctcaact
tttagtgggcacatctcacgtatttgtaagtttttggaagtggcctcaaaacaatcactt
gttctcattgatgaaatcggcagtggaactgatccatcagaaggtgtagctctttctacc
agtatcttacaatatttaaaggatcatgttaacttggctgttgtgaccactcattatgct
gatctaagtaatttgaaggaaaaggataccagttttgacaatgcagcaatggagttttca
cttgaaacattagaaccaacttataggatcctttggggatgtactggtgattcaaatgcc
ttaagcatagcacaatctattggcttcgatagaaatgtaattaatcatgcccaaaaatgg
gtagagaagttaaaaccagaacagcagcaagagcgaagaggaatactgtatcagtcattg
caggaggaaagaaaccgattaaaggcccaggctgaaaaggctgcatacattcataaagaa
atcatggacgtataccgtgagatccaaggggaggcagaagaccttgatagacgagagatg
gaacttatggcaaaggaaactcagcaggtccaacaagagctagaggatgcaaaatctcag
atggaaacaacgatacagaaatttgaaaaggaactcagagtctctgggcgtgataaactc
aattcacttattagagaatctgaatctgtgattgcctccattgtaaaatcccatactcct
cctgatagttttcctgtcagtgaagctgatcacggttcatatgctccacaatttggcgac
caagttcgtgtaaagggattgggagggaaattagccacagtggttgagttgcctggggat
gatgaggcaatcctggtacagtatggtaaagtgaaagtccgtgtgaaaaaaagtagcatc
atagctattccatccagtgcaaagaatgctgtaactagttcttccacaaatcaggggagg
cagagtctgcagaaagcacaacacaggggtaatttagatgtcaacagcaatgatgatctt
ccatatggtccagtggtgcgaacatctaagaatactgtggatcttcgcggtatgcgagtg
gaagaagcttctatccaccttgagatggcaattaatgcaagtcgaccatattcggttctc
tttgtgatacatgggatgggcactggcgctattaaggaacgtgcgcttgagatcttacag
agtcatgcacgtgtttctaattatgagcctgaaaatccaatgaattatggttgtaccatt
gcctatgtcaagtga
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