Lotus japonicus: 130711945
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Entry
130711945 CDS
T04348
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130711945
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130711945
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130711945
NCBI-ProteinID:
XP_057417721
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Position
4:53141630..53143972
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AA seq
407 aa
AA seq
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MPTSTSLSSLLFLFSLLTPTLISSSHLQDPELVVQEVNSKINASVARRNLGYLSCGSGNP
IDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRNGKIYVVTDSGDDNAVTPKPGTLRYAV
IQDEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIHGIHI
HDCKQGGNAMVRDSPKHFGWRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTA
ITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSANPTINSQGNRFVAPNDRFSKEVTKHEDAPESEWKGWNWRSEGDLLLN
GAFFTATGAGASGSYARASSLSARPSTLVGTITTGAGALNCRKGSHC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccaacctccacttcactctcttccctcctcttcctcttctctctcctcaccccaacc
ctcatttcctcttcccatcttcaggaccctgaattggttgtccaagaagtaaatagtaaa
atcaatgcctcagtggctaggaggaatttgggctacctatcatgtgggagtggaaacccc
attgatgattgctggaggtgtgacccaaactgggagaagaacaggcagaggctagcagac
tgtgcaattggcttcggcaagaacgccattggtggaaggaacggtaagatatacgtggtc
accgactccggcgacgacaacgccgtcactccgaagccagggacattgcggtacgcggtg
atccaggatgagccactatggatcatcttcgccagagacatggtgattcagctgaaggag
gagctgatcatgaactcgttcaagaccattgatggaagaggagcgagtgtgcacatcgct
ggtgggccctgcatcacggttcagtatgtgaccaacatcatcatccatgggatacacata
catgattgcaagcagggagggaatgctatggtgagggactccccaaagcactttgggtgg
aggactgtatcggacggtgatggtgtgtccatctttggtgggagccatgtctgggtggac
cattgctctttgtctaactgtaatgatgggttgatcgacgccatccatggttccacggcg
attaccatctctaacaattacatgacgcaccatgataaggtcatgctgctgggccacagc
gatagttacacccaagacaagaacatgcaggtcaccattgcttttaaccactttggtgaa
ggtcttgttcaaagaatgccaaggtgcaggcatggatattttcatgtggtgaacaatgac
tatacccactgggaaatgtatgctattggaggaagtgctaaccccaccatcaatagccaa
ggcaataggtttgttgcacctaatgacagattcagcaaagaggtgacaaagcatgaggat
gcaccagagagtgagtggaaggggtggaattggagatcagaaggggatttgttgttaaac
ggtgcgtttttcacagcaactggagctggagcctctggtagctatgcaagagcttcaagc
ctgagtgcaagaccatcaaccctagtgggtactataaccactggtgctggtgcactcaac
tgtagaaaaggttctcattgctag
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