Lotus japonicus: 130712015 Help Entry 130712015         CDS       T04348                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism lja  Lotus japonicus Pathway lja03013   Nucleocytoplasmic transport lja03040   Spliceosome Brite KEGG Orthology (KO) [BR:lja00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     130712015   09122 Translation    03013 Nucleocytoplasmic transport     130712015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lja03019]     130712015    03041 Spliceosome [BR:lja03041]     130712015 Messenger RNA biogenesis [BR:lja03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      130712015 Spliceosome [BR:lja03041]  Complex C   Other components    EJC/TREX     130712015  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     130712015 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N FapA Motif Other DBs NCBI-GeneID:  130712015 NCBI-ProteinID:  XP_057417816 LinkDB All DBs Position 4:complement(83022353..83039412) Genome browser AA seq 1904 aa AA seqDB search MSFPAIERVYVTEDCVREWKTGNAALKVSEPVPMLRFLYELCWTMVRGELPLHKCKTALD SVIFSEKASPDKIASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESDLVPVRLLHERC EEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAP TQKTSSTIGIIKSLIGHFDLDPNRVFDIVLECFELQPNNDVFIELIPIFPKSHASQILGF KFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRFD EANKIGRINLAATGKDLMDEEKQGDVTIDLFAALDTETEAIEERMSELQDSQTLGLLTGF LAVDDWYHAHILFERLSTLNAVEHTQICDSLFRLIEKSISSAYDVIRQAHVQNPGSSTGG STDAMDVDNSSGHGSFINLPKELFQMLACTGPYLYRDTMLLQKVCRVLRGYYLSALELVN RGNGALNPQSHVTGSPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLP YEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPM TVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSD WLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLT EEQLDAMAGSETLRYQATSFGVTRNNKALVKSSSRLRDSLLPKDEPKLAVPLLLLLAQHR SLVVINADAPYIKMVSEQFDRCHGMLLQYVEFLGSAVSPASNYAILIPSLSDLVHLYHLD PEVAFLIYRPVMRLFKSHRNPDVCWPLDDRSAASDVSSNIESDLADHSGSMVLDLGSGQS PISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEITKLHANLKSL EELSDNSSSAITKRKKEKERIQESLDRLTSELHKHEENVASVRRRLSYEKDKWLSSCPDT LKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMIC CCTEYEVGRLGRFLYETLKIAYYWKVIDFYLFTFFFIFFYFFKCLSGAVHFFMFFFSNLY YFQSDESIYERECGNMPGFAVYYRYPNSQRVAYGQFIKVHWKWSQRITRLLIQCLESSEY MEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKGDEREDLKVLATGVAAALAARKPSW VTDEEFGMGYLELKPAPSMTKSSAGTSVTVQSGISLGVSQTESASGKHLDSGNTVKDQIT RTKTADGKSERSESITAMKSDSGHVKIKGSSIVNGLDAQSSLPSSAGQSGTSKSGETPKQ VEESIIRASDEHATRTAESRTSAKRSVPAGSLSKPSKQDPAKEDGRSGKPVTRASGSMSS DKDIQPHASEGRHTGNTNASSASANGNTVSGSAKAPSAKVSFDGPGNESKADIGASKSSD IRASMGKDDGNDITDFTRGSSRVVHSPRHENTVTSKSSDKSQKRASSAEELDRLGKRRKG DVELRDLEGEARFSEREKLIDPRLADDKLGLDEIGLYRAGDKPLERPKDKGNERYEREHR ERLDRLDKSRGDDFVAEKPRDRSIERYGRERSVERIQERGSERSFNRLPEKAKDERSKDD RNKLRYNDAVVEKSHADDRFHGQSLPPPPPLPPNMVPQSVSAGRRDEDADRRYATRHSQR LSPRHEEKERRRSEETVVSQDDPKRRKEDDFRDRKREEMKVEEREREREREKVNILKEDL DLNAASKRRKLKREHLPTGEPGEYSPVAPPPPGIGITQAYDGRDRGDRKGPMIQHASYID EPGLRIHSKEVAGKMNRRDSDPLYDREWDDEKRQRADQKRRHRK NT seq 5715 nt NT seq  +upstreamnt  +downstreamnt atgtctttcccagccatagagcgtgtttatgtaacagaggactgtgttcgcgaatggaag actggcaatgctgccctcaaggtctctgaacccgtcccaatgcttcgctttctctatgag ctctgctggactatggttcgaggtgaattgccgttgcacaagtgtaaaacagcattagat tctgtcatattctcagagaaagcttcgcctgacaaaatagcatcaaattttgcagatata gtcacccagatggctcaagatcatacaatgtcaggagagttccgttctcgtctcattaaa ctggcaagatggcttgttgaatctgatttggttccagttcggctacttcatgaacgttgt gaggaagaatttttgggggaggctgagttgatcaaaataaaggctcaggagttgaaggga aaagaggtcagagtcaatacacgactcctttaccaacaaaccaaattcaatctcctcaga gaagagagtgagggctatgcaaagctggttactcttctttgtcgggactctgaagcgccg actcaaaaaacatcatcaacaattggcattattaagtcattaattggccattttgatttg gatccaaatcgtgtttttgatattgtccttgagtgttttgaacttcaacccaataacgat gtgttcatagagctgattcctatttttcccaagtcccatgcttcccaaattcttggattt aaatttcaatattatcagcggatggaagtcagcaatcctgttccatttggactctataga cttacagccttactcgtgaagcaagattttattgatcttgatagcatatatgctcactta ctccccaaggatgatgaagcatttgagcattataacactttctcgtccaagcgttttgat gaggccaataaaattggaagaataaaccttgctgctactggaaaagatctaatggacgag gagaaacagggggatgttaccatagatctttttgctgctttagacacggaaactgaagca attgaagagcgaatgtctgagcttcaagacagtcaaactttgggcttgcttactggcttt cttgctgttgatgactggtatcacgcacatatactatttgaacgcctctcaacactcaat gcagtggaacatactcaaatatgtgatagtttgttcaggcttattgagaagtcaatttct tcagcatatgatgttattcgtcaagcacatgttcaaaaccctggatcctccacaggaggc agcactgatgctatggatgttgataactcctcaggacatggttcttttataaatcttcca aaggagctttttcagatgcttgcttgcactggaccttatctctaccgtgatactatgttg ttacagaaggtttgtagagtgttgcgaggttattacctttctgctctagagcttgtaaat cgtggtaatggcgccttgaatcctcaatctcacgttactggaagccctcacctacacctt aaggatgcaaggctaagggtggaggatgctcttggagcatgtctactaccttctctacag ttgattcctgcgaatccagcagttggtcaggaaatttgggaacttatgagtctccttcct tatgaggtgcgatatcgcttatatggcgagtgggaaaaagatgatgagcgcattcctatg ctcttggctgcaaggcaaactgccaagttggacactagacgtattttgaaacggctagcg aaggaaaatttgaaacagctgggtcggatggttgcaaaattagctcatgcaaaccctatg accgtcctccgtacaattgttcatcagattgaggcatacagagacatgattactcctgtg gttgatgcatttaagtatttgactcagcttgagtatgatatattggaatatgttgtgatc gagcgattagcacttggtggacgtgataagttaaaggatgatgggctcaatttgtcagac tggcttcaatctctagcgtcattttggggccacctgtgtaagaagtacccatcaatggaa ttacggggccttttccagtatcttgtgaaccagctaaaaaaagggcaaggaattgagctt gttctgctgcaggagcttattcagcaaatggcaaatgttcagtacactgagaacttaact gaggaacagctggatgctatggcagggagtgagactctcagatatcaagcaacttcgttt ggagtaactcgaaataataaggcattggtaaagtcctctagcaggttgagagattcatta cttccaaaagatgaaccaaagttggcagtccccctcttactgctacttgctcaacatcgt tctctggttgtcatcaatgcagacgcaccctacattaagatggttagcgagcagtttgat agatgccatggaatgcttcttcagtacgttgaatttcttggcagtgcagtttcaccagca tcaaattatgctattcttattccctctctcagtgacctggtccacctttaccacctggac ccagaggttgctttcttgatatatcgccctgtgatgaggcttttcaagtctcataggaat cctgatgtttgctggcccttggatgatagaagtgctgcaagtgatgtatcttcaaacatt gagtctgaccttgcagatcattctggtagtatggttcttgatcttggctctggtcaaagt cctataagttggtcatatcttctagatactgttaaaaccatgttgccttctaaagcctgg aatagcctttctcctgacctatatgctacattttggggtctcacattatatgatctgtat gttccgaaaaatcgttatgagtcggaaataaccaagcttcatgctaatcttaagtctttg gaggagctttctgacaattcaagctcagcaatcaccaagaggaagaaagaaaaggaaaga attcaagaatctcttgatcgtctgactagtgaactccacaaacatgaagagaatgttgca tctgtccgtagaaggctttcttatgaaaaagacaaatggttaagttcctgtcctgatacc ttgaagattaacatggagtttcttcagcgttgtatattcccacgatgtactttcagtatg ccggatgctgtttattgtgctatgtttgtgcacacacttcattcacttggaacccccttt ttcaacacagtcaaccacatagatgttctgatttgtaagaccctacaaccaatgatatgc tgctgcactgaatatgaggtaggcaggcttggcaggtttctgtacgagactttgaagatt gcttactattggaaggtaattgatttttacttgtttacatttttttttatttttttttat ttttttaaatgcctttcaggggccgttcatttttttatgttttttttttctaacctttat tattttcagagtgatgaatctatttacgaacgagaatgtggaaacatgcctggatttgct gtttattacagatatcctaatagccagcgagttgcatatgggcagttcattaaggtacac tggaagtggagtcaaagaatcacacgtttacttattcagtgtctggaatctagcgagtac atggaaattagaaatgctcttataatgttgacaaaaatttctagtgttttccctgttact agaaaaagtgggattaaccttgaaaagcgggtagctaagattaaaggtgatgagagagag gatcttaaggtgttagcaactggcgttgcagctgcactggctgctaggaagccttcttgg gttaccgatgaagaatttggtatgggttatcttgagctgaagcctgcaccatctatgact aaatcttcagctggaacttcggtaactgtacaaagtgggataagtcttggtgtttctcaa actgagtctgccagtggaaaacatttggactccggaaacacagtcaaagaccagataaca agaacaaaaactgcagatggcaagtcagagagatctgaaagcattacagcaatgaaatct gattctggccacgtaaaaatcaagggtagttcaatagtgaatggattggatgctcagtca tccttaccctcatctgctggacaatctgggacgtcaaaatcaggggaaaccccaaagcaa gtggaagaatccataattagagcatctgatgaacatgcgacaagaactgctgagtcgaga acttcagcaaaacgttcagtgcctgctggttcactttcaaagccctcaaaacaagatcct gcaaaagaggatggaagatctggaaaacctgttactagagcttctggctccatgagcagt gacaaggatatacaaccccatgcatcagagggaagacacactggaaataccaatgcatct tctgcgagcgctaatggtaacaccgtttcaggttctgcaaaagctccatcagcaaaggtt tcatttgatggtcctggtaatgaatcaaaggcagatatcggggcttccaagtcttccgat attagggcttctatggggaaggatgatggaaatgatattactgacttcactagaggatct tctcgtgtagttcattcccctaggcatgagaacacagtcacttcaaagtcaagtgataaa agtcagaagcgagctagttctgctgaagagctagacagactaggtaaacggcggaaaggg gatgtagagctaagagatttagagggtgaagctcgtttctctgaaagagagaagctgata gatcctcgattggctgatgacaaattgggacttgatgaaattggtctgtacagggcagga gataagccattggaaaggccaaaagacaaaggtaatgaaagatacgaaagggaacacagg gaaagattggatcgtctggataagtctcgtggtgatgactttgttgcagaaaaacctagg gataggtcaatagaaagatatggaagagaacgatctgttgagagaatacaagagaggggt agtgagaggagtttcaatagactccctgagaaggctaaggatgaaagaagcaaggatgat agaaataaattacgctacaatgatgcagtagtagaaaagtctcatgcggatgaccgtttc catgggcaaagcttgcctccgccaccccctttacctccgaatatggttcctcaatctgtt agtgctggtaggcgtgatgaagatgcagacaggagatatgctacaaggcattctcaaaga ctctctccgaggcatgaagaaaaagaacggagacggtctgaagagactgtggtttctcag gatgatcccaaacgtagaaaagaagatgattttcgagaccgaaagcgtgaggaaatgaag gtggaggagagagaaagagagagagaaagggagaaagtcaacattctaaaagaagacttg gatttaaatgctgcatccaagagacgtaagcttaagagggagcatctaccaactggtgaa cctggggagtactcaccggtggcccctcctccccctggtattggtataacacaagcatat gatggaagagacaggggagacagaaaaggacccatgatccagcatgcaagttacatagat gaaccgggtctcaggattcacagtaaagaggtagccggcaagatgaatcgtcgtgattca gatcccttgtatgaccgtgaatgggatgatgagaagagacaaagagctgatcaaaagcga aggcaccggaagtaa

DBGET integrated database retrieval system