Lotus japonicus: 130712049
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Entry
130712049 CDS
T04348
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lja
Lotus japonicus
Pathway
lja00900
Terpenoid backbone biosynthesis
lja01100
Metabolic pathways
lja01110
Biosynthesis of secondary metabolites
Module
lja_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130712049
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lja01006
]
130712049
Enzymes [BR:
lja01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130712049
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130712049
2.5.1.29 geranylgeranyl diphosphate synthase
130712049
Prenyltransferases [BR:
lja01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130712049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
130712049
NCBI-ProteinID:
XP_057417860
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All DBs
Position
4:complement(16661389..16662909)
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AA seq
369 aa
AA seq
DB search
MSAVNLNTWARPSFVFNHATRSRSPTFYLYHGLRKIPISPIIPAKPQRQQLSSSSTVSAV
LTKEETLEAEEEKPTFNFKSYMIQKATQVNQALDDAVSLRDPVKIHEAMRYSLLAGGKRV
RPVLCLAACELVGGTEPMAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGE
DVAVLAGDALLAFAFEHIAVATAGVLPARVVRAVGELAKCIGSEGLVAGQVVDINSEGLS
DVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDAEVERLRKFASCIGLLFQVVDDILDV
TKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLIGFDPHKAAPLIAL
ANYIAYRQN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgtgaatctcaacacatgggcacgcccaagtttcgtcttcaaccatgccacc
agatccagatccccaacattctacctctaccatggccttaggaagatacccatttcgccg
attatccctgcaaagccgcagaggcaacagctttcttcttcttccacggtttccgcggtg
ctgaccaaggaggagacgctggaggctgaggaagagaaacccactttcaatttcaagtcc
tacatgattcagaaagccacccaggttaaccaggccctcgacgacgccgtttcgctccgg
gaccctgtcaagatccatgaagcgatgcggtactcgctcctcgccggcgggaagagagtc
aggccggttctctgcctcgccgcctgcgagctcgtcggagggactgagcccatggcgatg
ccggcggcgtgcgcgcttgaaatgatccacaccatgtcgctcattcacgatgacctccct
tgtatggacaacgacgatctccggcgagggaagccgacgaaccataaggttttcggggag
gacgtggcggtcctcgccggcgacgcgcttctcgccttcgccttcgagcatatcgccgtt
gccaccgccggcgttttgccggcgagggttgtccgggcggtcggggaactcgcgaagtgc
atcggctccgagggtctcgtcgccggccaggtcgtcgacatcaattctgaaggcttatcc
gatgtgggacttgagaggctcgagtttattcatctccacaaaaccgcggcgttgcttgaa
ggtgcggttgttctcggtgccattctcggtggtgggtctgatgcagaggttgagaggctg
aggaaatttgctagctgcattggattgttgtttcaggtggttgatgatattcttgatgtg
acaaagtcttcacaggaattggggaaaactgctggaaaagatttggtggctgataaggtt
acttaccccaagcttttggggatagagaagtccaaggagtttgctgagaagttgaaccgt
gatgcacaggaacaactcattgggtttgatcctcataaagctgctcctttgattgcttta
gctaattacattgcttacaggcaaaactag
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