Lotus japonicus: 130712118
Help
Entry
130712118 CDS
T04348
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
lja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130712118
09124 Replication and repair
03420 Nucleotide excision repair
130712118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130712118
03400 DNA repair and recombination proteins [BR:
lja03400
]
130712118
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130712118
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130712118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
130712118
NCBI-ProteinID:
XP_057417941
LinkDB
All DBs
Position
4:82907948..82909163
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATKGVFISCDIPMAQYIINMNASMPASDKFIIHILDNTHMFVQPHVEQMIRSQMAKF
REDNTYVKPN
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgccactaaaggagtgtttatttcctgtgacatacctatggctcagtatatc
atcaacatgaatgcttcaatgcctgcatctgacaagttcattatacatatcttggataat
acccacatgtttgttcaaccccatgtcgagcaaatgatacgaagtcaaatggccaagttt
agagaggacaatacatatgtcaagcctaattga
DBGET
integrated database retrieval system
