Lotus japonicus: 130712160
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Entry
130712160 CDS
T04348
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130712160
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130712160
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
130712160
NCBI-ProteinID:
XP_057417981
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Position
4:4736894..4741145
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AA seq
609 aa
AA seq
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FVVKSNFPSSPPRNQRNLTTLPPTWMADPTHFNGPSNGPTQVTFRLLCHASRVGSLIGKA
GVVIKSLQQATAARIRIDDAPPDSPDRVIRIISKLDGGEALLRVFEKVLDVAAEADEFDV
LDRVVCCRLLSDPAQVGAVIGKGGKVVEKIRAETGCKIRVFSDKLPAGTKPSDEIIEIQG
KVSSVKKALVAVASRIEECLPFDRTKTTASRPYEGFQHGTFDVPTETCTDKHIDHRQQKS
STLPDLSSRYNGNAYGVNSLSAEVNRVSALDPRALQKEVTFRILCSNDRVGAVIGKGGST
IRALQNETGANISIAPPVVECEDRLITITALENPESRYPSPAQKAVVLVFSRSVEAGFDR
GVDFGSKKESSVTARLVIQSNQVGCLIGKGGAIVSEMRKATGTMIRVIANNQFPKCTTDN
DQLVQISGQFLNVQDALYNATGRLRDNLFVSTQNNGGSKSLSSHSLRSLSQSMDHLSLSQ
NSNHPSSPWSWTPKSAGAINSRGSNDVGRGLTPQNGDLELVSGSKTAIVSKTAIVTNTTV
EIMVSNDIIDSVYGEDGGNLDRLKQISGAKVTVHEPLPGASTRAIVISGTPDETQAAQSL
LQAFILNGS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
tttgtggttaaaagcaatttcccctcttctccaccaagaaaccaaagaaaccttactaca
ctccctcctacttggatggccgacccgacccactttaacggaccctccaacgggccaacc
caggtcaccttccgcctgctctgccacgcttcacgcgtcggcagcctcatcggaaaagcc
ggcgtcgtcatcaagtccctccagcaagccacggcggccagaatccgaattgacgacgcc
ccgcccgattcccccgaccgggtcatccgtatcatctccaagctcgacggcggcgaggcg
ctgctccgggtctttgagaaggtgcttgatgtcgccgccgaggctgacgagtttgacgtc
ctggatagggtggtttgctgccggctgctgtcggaccctgcccaggtcggcgccgtcatc
ggcaagggagggaaggtggtggagaagattagggcggagactggttgtaagattagggtt
ttcagtgacaagttgcctgctggtactaaaccctcagatgaaatcattgagatacaaggt
aaggtgtcatctgtgaagaaggcccttgtggctgttgctagccggattgaagaatgtctt
ccatttgatagaacgaagacgacggcaagcagaccttatgaagggtttcagcatggaact
tttgatgttccaacagaaacttgcacagataagcacatagatcacagacagcagaagagc
tctactttgcctgatttatcgagtaggtataatggcaatgcctatggagttaactcattg
tcagctgaagtcaacagagtctcggcccttgatccaagagcacttcagaaggaagttacc
tttagaattctttgttcaaatgatagagttggtgctgtaattggaaagggtggtagtact
atacgagctcttcagaatgaaacaggggctaatataagtattgctcccccagtagttgag
tgtgaggatcgattaattactattactgctttagagaatcctgaatcaaggtatccctct
ccagcacagaaggctgttgtgcttgttttctctaggtctgttgaggctggttttgacagg
ggggtagactttggatccaaaaaggagtcatctgttactgctcgacttgtaatacaatcc
aaccaagtaggttgtttaatagggaaagggggagcaatagtctcagaaatgcggaaggcc
acagggactatgataagagtaattgcgaacaaccagtttccaaagtgtacaacagataat
gatcaattggtacagatatcaggacagttcttaaatgttcaagatgcattatataatgct
actggcagactgcgagataatctttttgtcagcacacaaaacaacggtggatcaaagagc
ctttcctctcacagtctcagatccttgtctcaaagtatggatcatctttcactttctcaa
aattcaaatcatccttcttcaccatggtcatggacaccaaagtcagcgggcgcgataaat
tctagaggcagcaatgatgttggcaggggattgactcctcaaaacggtgacctagagctt
gtcagtgggagtaaaaccgccattgtgagtaaaactgccattgtgactaatacaaccgtg
gagattatggtttccaatgatatcattgactctgtttacggagaagatggtggcaaccta
gatcgattgaaacagatatctggtgctaaggttaccgttcatgaacctcttcctggggca
agcaccagggctattgttatatccggcacacctgatgaaactcaagcagcccagagcctt
ctccaagcatttattctcaacggatcatga
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