Lotus japonicus: 130713439
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Entry
130713439 CDS
T04348
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130713439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130713439
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
130713439
Prokaryotic type
Archaeal type
TFB
130713439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
TFIIB_C_1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
130713439
NCBI-ProteinID:
XP_057419189
LinkDB
All DBs
Position
1:complement(96420982..96421950)
Genome browser
AA seq
322 aa
AA seq
DB search
MSNDLFCSDCKRETELVFDYSSGDTICSECGLVLEDHYIQETTEWRTFANNESAGDKDPN
RVGGATNPLFADGGLSTTIAKPKGGRAASSLDVQWPKHGWNSFSNAEHNRLMMAFGAITT
MSERLGLVAIINDRAKELYKRVEDQKSSRGKNQEALMAACLYIACKQEDKPRTVKEICSA
NGAITKKEIGRAKEYIVKQLGLGLESEENMGRTIHAGDFMRRFCSNLGMNNQAVKAAQEA
VEKSQEFDIRRSPISIAATVIYIITQLSNDKKPLKDIALATGVAEGTIRNSYKDLYPHVS
KIIPNWYANAKHEDYLKNLCSP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgacttgttctgctcagattgcaagcgcgagacggagttggtgtttgactac
tcgtcaggggacacaatatgttcggagtgcggcctcgtcctggaggatcactacatccag
gagaccaccgagtggcgaaccttcgctaataatgagtctgccggagacaaagaccccaac
cgtgtaggaggggccaccaaccccctcttcgcggacggcggcctctccactaccattgcc
aagcccaaaggcggccgcgccgcgtcttccctcgacgtccaatggcccaaacatggttgg
aatagtttttccaacgccgaacacaaccgcctcatgatggccttcggtgccatcaccacc
atgtccgagaggttaggactcgtcgcgatcatcaatgatcgggctaaagagttgtacaag
cgtgttgaagatcaaaagtctagcagaggaaaaaatcaggaagcattaatggctgcttgc
ctctacattgcttgtaaacaagaagacaagccacgcacggttaaggaaatttgctctgcc
aatggagccatcaccaagaaggaaattggcagagcaaaagaatacatagtgaaacaactg
ggtttgggcttggaatctgaagagaatatgggaaggacgatacatgctggggattttatg
aggagattttgttctaatcttggtatgaataatcaagctgttaaagctgctcaagaagct
gttgagaaatcacaagaatttgatataaggaggagtccgatatcaattgctgcaactgtt
atatacatcataactcaactttctaatgataaaaaacctctcaaagatatagcactagcc
actggagttgcagaagggactattaggaactcttacaaggatctttacccccatgtttca
aaaataataccaaactggtatgccaatgccaaacatgaggattatttgaagaacctttgc
agcccttga
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