Lotus japonicus: 130713443
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Entry
130713443 CDS
T04348
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130713443
03460 Fanconi anemia pathway
130713443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130713443
03400 DNA repair and recombination proteins [BR:
lja03400
]
130713443
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130713443
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Topoisomerases
130713443
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
130713443
FA (Fanconi anemia) pathway
130713443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
130713443
NCBI-ProteinID:
XP_057419194
LinkDB
All DBs
Position
1:complement(77276286..77301172)
Genome browser
AA seq
916 aa
AA seq
DB search
MGINVLNVAEKPSVAKSVATILSQNQGLRVRNGHSRYNKIFEFNYNIRGQPCHMLFTSVT
GHLMELEFEERYRKWHSCDPADLFQAEVRKTVPEDKKDIKRTLEEEARRCQWLVLWLDCD
REGENIAFEVVDVCRPVNPRLTIKRARFSALIERDIHEAVQNLVEPNKFFADAVDARQEI
DLRIGASFTRFQTMLLKDAFVIDNAGDGRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEE
FWTINCSHRSDEGLANFSWMRGHVFDYTCAVIIYEMCIEGQTATVSNVRHQEKLKYPPHP
LNTIELEKRASRYFRMSSEHTMKVAEELYQTGFISYPRTETDSFSPRTNLHAIVQEQQGH
PEWGIYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQNHRKLYELVVRH
FLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYPFETWGGSLIPTYTVGQQF
TPTALTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDASTRFT
PTNLGEALVMGYDDIEMAYKLWKPELRSAMESDMKSVSEGTKGKDAVLATSLDKMKACFL
HARLNKVKLLEAMSIFFQRSNRSAGDELHATGEVVRRCGLCQESDMVLKKNRDGNFMVGC
LGFPQCRNAVWLPGSVSEAAVTTNPCNFCTPGPVYRIQLKFRQLEIPPNYNINHLGCIGG
CDEILRQLTEICGTGPRMPARARGPTASTSSNVNHNNPRQTVCMNCQETGHASNDCPSLT
LRSRNAQHPRMNQQSGETSVSCSSCGTPCALRTANTANNRGRKFYSCPSQECNFFVWEDS
LNNGTGGRSFSRSNNIPPSNSNRNSGRGSRGRGRQNASNSSNGTFVSATGDPVSGRRCFV
CGDPSHFANVCPNRGA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggggatcaacgtcctcaacgtggcggagaagccctcggtggcgaaatcggtggccacc
atactctcacagaaccagggtctacgagtcaggaatggccattcccgctacaacaagatc
ttcgagttcaactacaacatccgcggccaaccctgccacatgctcttcacctccgtcacc
ggccacctcatggagctcgaattcgaagagcgttaccgcaaatggcactcttgtgacccc
gccgatctcttccaagccgaagtccgtaaaaccgttcccgaggacaagaaggatatcaag
aggacattggaggaggaagctaggcggtgtcagtggcttgttttgtggctcgattgcgat
cgagagggtgagaacattgcgtttgaagtggtcgacgtatgtaggccggtgaatcctcgc
ctcacgatcaagagggctcggttttctgcactgattgagagggatatccatgaagctgtg
cagaatcttgttgagccgaataagttttttgcggatgctgttgatgctaggcaagaaata
gatcttcgtataggggcctctttcaccagattccagaccatgttgttgaaagatgctttt
gtcattgacaatgctggagatggcagaaatcttgtcttgagttacggcccttgccagttc
cctacacttggatttgttgtggaaagatattgggagatacaagcacatgagccagaagag
ttttggacaatcaactgctctcataggtcagatgaaggccttgctaatttcagctggatg
cggggccatgtgtttgattatacttgtgcagttataatctatgagatgtgcattgaggga
caaactgcaactgtctcgaatgttagacaccaagaaaagctgaagtatcctccacatcct
ctaaatactattgagcttgagaaacgagcttcacgatacttccggatgagctctgaacac
acaatgaaggtggcagaagaactttaccaaactggtttcatcagttatcctcgtacagaa
actgatagcttttctccaaggactaatttgcatgcaattgtgcaagaacaacaagggcat
cctgaatggggaatatatgcacagcggttgttggaccctgaggcgggactttggagaaac
cctagaggtggcggacatgatgacaaggctcatccacccatccaccccacaaaattttct
gccggggaatcaggatggagccaaaatcaccgcaaactatatgagctggttgttcgccac
ttcctggcatgtgtctcaaagcctgcagttggagctgaaaccacggtagaaattgacatt
gctggtgaactattttctgcttgtggcagggtgattctagagaaaaactacttggatgtt
tatccctttgaaacttggggtggatcattgattccaacatatactgttggtcaacagttc
actccaacagcattgacccttgattcaggagtaaccagaccaccaccacttctgagtgaa
gctgatctgctgagttgtatggacaaggaaggtattggtacagatgccaccatgcacgat
cacataaagaagctgcttgatcggttttatgcaactaaagatgctagcactcgattcaca
ccaactaatcttggtgaggcacttgtcatgggatacgatgacattgaaatggcgtataaa
ctatggaaaccagaacttagatctgctatggaaagtgacatgaaatccgttagtgaaggg
actaaaggcaaagatgcagttctggcaactagcttggataagatgaaagcttgtttctta
catgcaagattgaataaagtgaaacttttagaggccatgtcaatatttttccaaagatca
aatagatctgccggtgatgagctgcatgcaactggagaagttgttagacgatgtggactc
tgccaagaatcagacatggtgctaaagaaaaatcgagatggcaattttatggtcggatgc
ttgggtttccctcagtgtaggaatgccgtttggctccctggatcagtatcagaagcagct
gtgaccaccaatccttgcaacttctgcactcctggtcctgtttaccggattcagttgaag
tttcggcagctggaaataccaccaaactacaatatcaaccatttgggttgcattggtggc
tgtgatgagattctcagacagttgactgaaatatgtggcactggccctcgcatgccagca
agagctcggggacccactgcatcaaccagcagcaacgtcaaccataataacccaaggcaa
acagtttgtatgaactgtcaagaaacagggcatgcttctaatgattgtccttcattgact
ttacgctccaggaatgcccaacatcctagaatgaaccaacaaagtggggaaacttctgtt
tcatgcagttcgtgtggaacaccatgtgctttgcgtactgcaaatacagcaaataatagg
ggaaggaagttctactcatgtccatcacaggagtgcaacttttttgtatgggaggatagc
ctcaacaacggaactggaggaagaagtttttcacgttcaaataatattccaccttccaac
tctaaccgaaatagcggccgtggatctcgtggcagaggtagacagaatgcgtccaactct
tctaatgggacttttgtgtcagccaccggggatcctgtttctggtagaaggtgctttgtg
tgtggtgatccatctcactttgctaatgtctgccccaatcgtggagcctga
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