Lotus japonicus: 130713830
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Entry
130713830 CDS
T04348
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
lja
Lotus japonicus
Pathway
lja04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130713830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130713830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
130713830
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
130713830
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130713830
Exosomal proteins of other body fluids (saliva and urine)
130713830
Exosomal proteins of colorectal cancer cells
130713830
Exosomal proteins of bladder cancer cells
130713830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
GDH_C
Chorion_S16
Motif
Other DBs
NCBI-GeneID:
130713830
NCBI-ProteinID:
XP_057419624
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All DBs
Position
4:complement(6088486..6090234)
Genome browser
AA seq
213 aa
AA seq
DB search
MSTTMEVKLWNDKREREMYDNFAELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHF
KTLSSTLRDTVPSIDRFADTYRMECPAAINRLVVSGVPATVEHRAASTASASTSAATVAE
CVQNFITSMDSLKLNMIAVDQVHPLLSDLYASLNKLTILPPDFEGKTKMKEWIARLSKMG
AADELTEQQARQLHFDLESSYNSFMAALPNAGT
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagtactactatggaggttaagctctggaatgacaagcgcgagagagaaatgtatgac
aactttgctgagctttatgctattatcaaagctactgagagacttgaaaaagcctatgtt
agagatataatctcgccgcaggaatatgaattagagtgccagaagctgatagctcatttc
aaaaccttatcttccaccctgagagacactgtgcctagcattgatcgatttgcagatact
tacaggatggagtgcccggcagcaattaaccgcctcgtggtatctggcgtgcctgctacc
gttgagcaccgggccgcttctaccgcctcagcatccacctcagctgccactgtggctgag
tgtgtgcagaattttattacatcaatggattccttgaaacttaacatgattgctgtggat
caggtgcacccgttgctctcggacctttatgcttcactgaataagttgacgattttgccg
ccagatttcgaagggaaaacaaaaatgaaggaatggattgcaaggttatcaaagatgggt
gcagctgatgaattaacagaacagcaggctaggcagcttcactttgatcttgagtcttct
tacaattcctttatggcagctctgcccaatgctggtacgtga
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