Lotus japonicus: 130713907
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Entry
130713907 CDS
T04348
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lja
Lotus japonicus
Pathway
lja04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130713907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lja04040
]
130713907
Ion channels [BR:
lja04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130713907
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
130713907
NCBI-ProteinID:
XP_057419719
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Position
4:complement(66047401..66056590)
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AA seq
732 aa
AA seq
DB search
MFDSGHKSEYMGGQRETFLRLDDFDPRLSASSNAGVMKSGFGIDKLSHGGHGSSPTSRSF
KRGMRKGSEGLKSLGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLLNKFFVVSCILS
VSVDPLFFYLPVINDRLHCLGIDRKLATIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRV
FGRGELVIDSGQIARRYLQRYFIIDFLSVVPIPQIVVWRFLQTSKSSDVLATKRALFFVI
LLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERND
SCWQKACSENGCNQNFLYCGSEHADGYTAWQNRSEAILKSKCSADVDPPPFDYGIFEQAL
SSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPWEVIFSITLAIFGLILFALLIG
NMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLATRGVDEDCLV
QSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPSLFTEHTYIVREGDPVD
EMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPRSGSNLPTSTRTVKA
LTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKKKI
LKLRQKEEADESEGTHDNASGISSSLGATLLASKFAARTLRGVHRNRLAKTARELVKLQK
PPEPDFTADDAD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagcggtcacaaatcagaatacatgggtggccagagggaaacttttttgagg
ttggatgactttgatcctagactgtctgcatcttctaatgctggagttatgaaatctgga
tttggtattgataagttaagccatggtggtcatggaagcagcccaacctctaggtctttt
aaaagaggaatgagaaagggatctgaaggactgaagtcacttggtcggtcacttggattg
ggggtatctagggcggtgttcccggaagatcttaaagtgtcagaaaagaagatatttgat
cctcaagacaaattcttgctcttattgaacaagttttttgttgtctcatgcattttatct
gtgtctgtggatccactgtttttttatctccctgttatcaatgatcgattacactgtctt
ggaatagaccgaaagttggcaacgatagttaccaccttaaggacagtcattgatgctttc
tatcttatacacatggctctccaattccgaactgcttatattgctccgtcatctcgtgtc
tttgggcggggtgagcttgtgatagattcaggacagatagccaggcgatacttgcagcgg
tatttcatcattgatttcctgtctgtggtgccgatacctcagattgtggtttggagattt
cttcagacgtcaaaaagttcagacgtactagcaacaaagcgggccttgtttttcgttatc
ttgcttcaatatgttcctagatttcttcgaatggtaccattgacttcagaacttaagaga
acagccggtgtctttgctgaaactgcatgggcaggtgcagcatattatttgctgttgtac
atgcttgctagtcatatagttggtgctttttggtacttgttagctattgagcgcaatgac
tcatgctggcagaaagcttgcagtgagaatgggtgcaaccaaaacttcctgtattgtggc
agtgagcatgcagacggttatactgcctggcagaatagaagtgaagctattcttaagtca
aagtgctctgcagatgttgatcctccaccttttgattatggaatttttgaacaagccctg
tcatctggtataatttcatctaaaaagttcgtctccaaatactgttactgtttatggtgg
gggctccaaaatttgagtacacttggtcaggggcttcaaactagcacctacccttgggag
gttatcttttcaataacactagctatatttggcctcatcctttttgcacttctaattggc
aacatgcagacatatcttcaatctcttaccattaggctcgaggaaatgagagtcaaaagg
cgtgactcggaacagtggatgcatcatcgcttactcccaccagagcttagagagcgtgtg
agacgatatgatcaatataagtggttggcaacacgtggtgtagatgaagactgtttagtt
cagagtctaccaaaggatcttcgaagagatattaagcgtcatctgtgtttggctttagtg
aggagggttccgttgtttgagagcatggatgagagactgcttgatgccatatgtgagaga
cttaaaccaagtttatttacagagcatacttacattgtccgggaaggagatcctgttgat
gagatgcttttcatcatacgtggtcgccttgagagtgttaccacagatggtgggaggagc
ggattcttcaaccgtggttttctaaaagaagctgatttctgtggggaggagcttttaact
tgggccctggaccccagatctggttctaatctcccaacttctactcgaacagtaaaggca
ttaacagaggttgaggcttttgccttaactgcagatgagttaaaatttgttgcgagtcag
tttaggcgccttcacagtagacaggttcaacacactttccgcttttactcgcaacaatgg
agaacttgggctgcgtgctttatccaagctgcatggcgtcgatattgtaaaaagaaaatt
ctgaagcttcgtcaaaaggaagaagctgatgagtcagaaggaactcatgacaatgctagt
ggcatttcctccagcctgggtgcgaccttgttagcctcaaagtttgcggcacgcacactt
cgtggtgtgcatcgcaatcgacttgctaaaacggcaagggagttagtaaaactacaaaaa
ccccccgagcctgactttacagcagatgatgctgactaa
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