KEGG   Lotus japonicus: 130713994
Entry
130713994         CDS       T04348                                 
Name
(RefSeq) protein RRC1 isoform X1
  KO
K12842  U2-associated protein SR140
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130713994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lja03041]
    130713994
Spliceosome [BR:lja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130713994
 Complex B
    130713994
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 130713994
NCBI-ProteinID: XP_057419829
LinkDB
Position
4:24206373..24228232
AA seq 969 aa
MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDITPGSKTFVRGGTIN
PNEKLKDDSEGEKSKDGVSIPKKGSRYVPSFIPPPLATKGKESERKKEEEKPKEKEKGKP
RNIDFFMEELKHEQEMREKRNQERENWRDGRPVEHSTTVSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPS
GPPVTSVPSQNSELVLTPNVPDIMVTPPEDDHLRHLIDTMALYVLDGGCAFEQAIMERGR
GNPLFNFLFVLGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPQLPPSRSP
DHEKESGSTHAGGRSRRVEPERTLTDAQRDEFEDRLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLRETPIPTKIARLMLVSDILHNSSAPVRNASAYRTKFEAALPDIMESF
NDLYRSIMGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRPGNSGVVPFHSIC
GDAPEIEQKITSEDTVVGGKINQDAALAMGRGAATQELMNLPLAELERRCRHNGLSLVGG
REIMVARLLSLEEAEKQRVYELDDELKYPHGQASSAKYSSGRRETSAELEPVGYSGWNHY
GDDDLQSQGKESVPLAPTLPIPQPELKAFTKKEKNDPVLPASKWAREDDESDDEQRSGKN
LGLSYSSSGSENVGGGHIKADESESAADTSFSAHADSGLNEEQRQKLRRLEVALIEYRES
LEERGIKNLEEIEKKVQTHRKRLQAEYGLSDSGEDGQGNRRSSSERRDRHDFSRKRHRSP
SPRGSPQHRLSSKDRDREHDLERDRDRQRDRSHDFDSDRGRDRHREKSGSRDRDDHDKDR
SRDRRRRAK
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgagttcgttctccatcacacggaaaaagacgccgttccagaagcatagagaagaggag
gaggcaaagaagaagagagcagaagatgagaccgctcgcttgtatgctgaatttgtagag
tcatttcaaggggatatcacgcctgggtcaaagacttttgtccgaggaggaacaatcaat
cccaacgaaaaattgaaagatgattctgagggtgaaaagtccaaagatggggtgtctatt
ccaaagaagggaagtaggtatgttccatcttttataccacctccactggcaaccaagggg
aaggaatctgaaaggaaaaaagaagaggaaaaacccaaggagaaagagaaaggaaagcca
aggaacattgatttttttatggaggagctaaagcatgagcaagagatgagggagaaacga
aatcaagaacgtgaaaattggcgtgatgggcgtccggtagaacattctactactgttagt
cgttttgatgaactgcctgatgattttgatccaagtggaaaacttccaggatcatttgat
gatggtgatccacaaactacaaatctttatgttggaaatctctcgcccaaggtggatgaa
aatttccttctccgtacttttggaagatttggacctattgctagtgtgaaaatcatgtgg
cctaggactgaggaggagcgaaggcggcaaagaaactgtggttttgtggctttcatgaac
cgagctgatggacaggctgctaaagatgaaatgcaaggagttgtggtttatgaatatgaa
ttaaaaattgggtggggaaagtctgttgcgctcccgtcacaagcattacctgcacctcca
ccggggcatatggccatcaggagtaaggagggtagtactgtgatcttgtctggcccatca
ggtccaccagtaacgtctgtgcctagtcagaactctgaactggttcttactcctaatgtt
cctgatataatggttacacctcctgaggatgaccatctaaggcatttaattgatactatg
gctttgtatgtcctggatggaggatgtgcttttgaacaagcaattatggagaggggtcgt
ggcaatcctctttttaatttcttatttgttcttggctcgaaggaacatacctactatgtt
tggagactctactcatttgctcagggtgacactcttcaaagatggcggactgaacctttt
atcatgataacgggtagtggaaggtggattcctccccaattaccaccatcgagaagtcca
gatcatgaaaaggagtctggttccacacacgctggaggaagaagcaggcgtgtagagcct
gaaagaacattgactgatgcacaacgggatgagtttgaagataggctgcgtgctttaaca
ttagagaggagccaaataaaagaggctatggggtttgctttggataatgctgacgcagct
ggggagatagttgaagttttgacggaatccttgactcttcgagaaactcctattccaacg
aaaattgcaaggcttatgcttgtctctgatattcttcataatagtagtgcccctgtaaga
aatgcatcggcatatcggacaaagtttgaagcagcactgcctgacataatggagagtttc
aatgacttgtatcgtagtataatgggacgtattactgcagaagccctaaaggaacgagtc
ctgaaagttctgcaagtgtgggccgactggtttctcttttcagatgcttatgttaatggc
ttaagagccactttcctccgacctgggaactctggtgtggtgccattccattccatatgc
ggtgatgcacctgagattgagcagaagatcacttctgaagatacagttgttggtggcaag
atcaaccaagatgctgcattggcaatgggtcgaggagctgcaacgcaggagctaatgaat
cttcctcttgctgagctagaaaggcggtgccgacacaatggattatcactagttggtggt
agagaaatcatggtcgcaaggttgttaagtcttgaagaggcagaaaaacagagggtttat
gaactggatgatgaattgaaatatccccacggccaagctagttctgcgaaatattcaagt
ggtcggcgagaaacaagtgcagagcttgaaccagtgggatattctggatggaaccattat
ggggatgatgatttgcaatcacaaggcaaagagtctgtacctttagcgccaactcttcct
attccacagcctgaacttaaagccttcacaaaaaaggagaagaatgacccggttttacct
gcctctaaatgggctcgggaggatgatgagagtgatgatgagcaaagaagtggaaaaaat
ctcggattaagctactcatcttctggcagtgagaatgtgggtggtggtcatattaaagct
gatgaatcagagtctgctgctgatacaagtttttcagctcatgctgacagtggactgaat
gaagaacagagacaaaagttgagacgcttggaggttgctttgattgaatatcgtgagtct
cttgaagaaaggggaatcaaaaacttggaggaaattgagaagaaagttcagacgcaccgg
aaacggctgcaagcggagtatgggttatcagattctggtgaagatggacaaggcaataga
agatcatcttcagagaggagggatagacatgatttctcgaggaaacggcaccgtagcccc
agtccaaggggtagtccacaacacagattatctagcaaagacagagatagagaacatgat
ttagaaagggatcgagaccgacaaagagatagaagtcacgattttgatagtgatagagga
agggaccggcaccgggaaaagagtggaagcagggacagggatgatcatgataaggataga
agcagggaccggagacgacgggcgaaataa

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