Lotus japonicus: 130714093
Help
Entry
130714093 CDS
T04348
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
130714093
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130714093
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130714093
Protein phosphatases and associated proteins [BR:
lja01009
]
HAD phosphatases
Fcp/Scp phosphatases
130714093
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130714093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
130714093
NCBI-ProteinID:
XP_057419952
LinkDB
All DBs
Position
4:complement(65942512..65948163)
Genome browser
AA seq
443 aa
AA seq
DB search
MSIVTDSPVHSSSSSDDFIAYLDDALDAGSPNSSSSDEEAENGDEFESVSRVKRQKVEIT
EEIEGSTSEGTMGLNLEASVEGECTHPGSFGDMCIRCGQKLDGESGTTFGYIHKGLRLHD
EEISRLRNTDVKNLLCRKKLYLVLDLDHTLLNSTHLAHLSSEEVHLLTQADSLGDVSNGS
LFKLEHMHMMTKLRPSVRTFLKEANEMFEMYIYTMGDRPYALEMAKLLDPRGEYFNAKVI
SRDDGTQKHQKGLDVLLGQESAVLILDDTEHVWMEHKDNLILMERYHFFGSSCRQFNLNC
KSLSESKSDEDETDGALARVLNVLKQVHCTFFDKLEEDLVDRDVRKVLSSVRSEVLSGCV
IVFSRILHSALPALKKMAERMGATCLTELDPSVTHVVATDAGTEKSRWAVKEKKFLVHPR
WIEAANYFWQKQPEENFVVKKMQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgttacagattctccagtacattcttcatcaagcagtgatgacttcattgca
tatcttgatgatgcactagatgcgggttcacccaactcatcctcctctgacgaagaagct
gaaaacggagacgagtttgagagtgttagcagagtcaaaagacaaaaagttgaaatcact
gaggaaattgaggggtctacatcagaaggaaccatgggactgaatttagaggcctctgtg
gagggtgaatgtacacatcctggatcatttggagatatgtgtatacgttgtgggcaaaag
ttggatggggaatctggtactacatttggatacatacataagggactgagacttcatgat
gaggaaatttctagattacgcaatacagacgtgaagaatctgttgtgtcgaaaaaagctt
tacttggttcttgacctagatcacacattgcttaactccactcaccttgctcatttgagc
tctgaagaggtgcatttacttacccaggcagattctctaggagatgtctctaatggtagt
ctcttcaaattggagcatatgcatatgatgaccaagttgaggccttctgttcggacattt
ctaaaagaagcaaatgaaatgtttgagatgtacatatacaccatgggtgatcggccctac
gctctagagatggctaagctgcttgatcctcgaggagaatacttcaatgcgaaggtgatt
tctcgagatgatgggactcaaaagcatcagaagggtcttgatgttttgctggggcaagaa
agtgcggttcttattctcgatgacacggaacatgtatggatggagcataaagataatctg
atactgatggaaagataccatttttttggttcaagttgtcggcagtttaatttaaattgc
aaatccctttctgaatcgaagagtgatgaagatgaaactgatggagcacttgcaagagtt
ctcaatgtgctcaaacaagtccactgcacattctttgacaaacttgaagaagatcttgtt
gatcgagatgtaaggaaggttttgtcatcagttcgaagtgaagtcttaagcggatgtgtg
atcgttttcagccgaattttgcattcagcattacctgctctcaagaagatggcagagcgg
atgggagctacttgtttgacagagcttgacccctctgtgacacatgtagttgctaccgat
gctggaactgagaagtcccggtgggcagtgaaagaaaagaagtttttggttcatcctaga
tggatagaagctgcaaattatttttggcaaaagcagcctgaagagaacttcgttgttaaa
aaaatgcagtag
DBGET
integrated database retrieval system
