KEGG   Lotus japonicus: 130714098
Entry
130714098         CDS       T04348                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
lja  Lotus japonicus
Pathway
lja03083  Polycomb repressive complex
lja04120  Ubiquitin mediated proteolysis
lja04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130714098
   04120 Ubiquitin mediated proteolysis
    130714098
  09126 Chromosome
   03083 Polycomb repressive complex
    130714098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130714098
   04121 Ubiquitin system [BR:lja04121]
    130714098
   03036 Chromosome and associated proteins [BR:lja03036]
    130714098
Membrane trafficking [BR:lja04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    130714098
Ubiquitin system [BR:lja04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     130714098
   Cul7 complex
     130714098
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     130714098
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     130714098
SSDB
Motif
Pfam: Skp1 Skp1_POZ Ribosomal_L1 Methyltransf_16 ICAM_N
Other DBs
NCBI-GeneID: 130714098
NCBI-ProteinID: XP_057419964
LinkDB
Position
4:54389489..54390048
AA seq 162 aa
MASSSSSSKKITLKSSDGEAFELDEVVALESETIKHMVEDNCADTAIPLPNVTSKTLALV
IEYCKKHVEAASGSGEKPVTKEELKEWDAEFAKGHDQATLFDLILASNYLNIKSLLDLTC
QAVADIIEKKSPEQVREIFNIKNDYTPEEEEQVRKENEWAFE
NT seq 489 nt   +upstreamnt  +downstreamnt
atggcatcctcatcatcatcatcaaagaagatcactctaaagagttccgacggcgaggct
ttcgagcttgacgaggtggtggcgctggagtctgagaccatcaagcacatggtggaggac
aattgtgccgacaccgccatccctcttccaaacgtgaccagtaagactctcgctctggtg
attgagtactgcaagaagcatgttgaggctgcttccggttccggcgagaagccggttact
aaagaggaactcaaggaatgggacgctgagttcgccaagggtcatgaccaggctaccctc
tttgacctcatcctggcatcaaactacttgaacatcaagagtcttttggaccttacttgc
caagctgtggctgacattatcgagaaaaagagtccggagcaggttcgcgagatctttaac
atcaagaatgattacaccccggaggaagaggaacaagttcgcaaggaaaacgagtgggct
tttgaatga

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