Lotus japonicus: 130714098
Help
Entry
130714098 CDS
T04348
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
lja
Lotus japonicus
Pathway
lja03083
Polycomb repressive complex
lja04120
Ubiquitin mediated proteolysis
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130714098
04120 Ubiquitin mediated proteolysis
130714098
09126 Chromosome
03083 Polycomb repressive complex
130714098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130714098
04121 Ubiquitin system [BR:
lja04121
]
130714098
03036 Chromosome and associated proteins [BR:
lja03036
]
130714098
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
130714098
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
130714098
Cul7 complex
130714098
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130714098
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
130714098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Ribosomal_L1
Methyltransf_16
ICAM_N
Motif
Other DBs
NCBI-GeneID:
130714098
NCBI-ProteinID:
XP_057419964
LinkDB
All DBs
Position
4:54389489..54390048
Genome browser
AA seq
162 aa
AA seq
DB search
MASSSSSSKKITLKSSDGEAFELDEVVALESETIKHMVEDNCADTAIPLPNVTSKTLALV
IEYCKKHVEAASGSGEKPVTKEELKEWDAEFAKGHDQATLFDLILASNYLNIKSLLDLTC
QAVADIIEKKSPEQVREIFNIKNDYTPEEEEQVRKENEWAFE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcatcatcatcatcaaagaagatcactctaaagagttccgacggcgaggct
ttcgagcttgacgaggtggtggcgctggagtctgagaccatcaagcacatggtggaggac
aattgtgccgacaccgccatccctcttccaaacgtgaccagtaagactctcgctctggtg
attgagtactgcaagaagcatgttgaggctgcttccggttccggcgagaagccggttact
aaagaggaactcaaggaatgggacgctgagttcgccaagggtcatgaccaggctaccctc
tttgacctcatcctggcatcaaactacttgaacatcaagagtcttttggaccttacttgc
caagctgtggctgacattatcgagaaaaagagtccggagcaggttcgcgagatctttaac
atcaagaatgattacaccccggaggaagaggaacaagttcgcaaggaaaacgagtgggct
tttgaatga
DBGET
integrated database retrieval system