KEGG   Lotus japonicus: 130714197
Entry
130714197         CDS       T04348                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
lja  Lotus japonicus
Pathway
lja03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    130714197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lja04121]
    130714197
   03036 Chromosome and associated proteins [BR:lja03036]
    130714197
Enzymes [BR:lja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130714197
Ubiquitin system [BR:lja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130714197
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     130714197
    Noncanonical PRC1 (PRC1.1)
     130714197
    Noncanonical PRC1 (PRC1.3/1.5)
     130714197
    Noncanonical PRC1 (PRC1.6)
     130714197
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_6 zf-C3HC4_5 zf-UDP zf-RING_11 zf-rbx1 DUF5810 zf-RING_4 zf-C3HC4_4 DUF7044
Other DBs
NCBI-GeneID: 130714197
NCBI-ProteinID: XP_057420069
LinkDB
Position
4:7064803..7069292
AA seq 416 aa
METEKRSHDAPHEEDADADADALTMIMDNYNGGSEPESDGSNSSSSEEEPEDEYMLLDLS
DLHQQFQCAICLGIIRKTRTVMECLHRFCKDCIDKSMRLGNNECPTCRTHCPSRRSLRDD
PNFDALIAAVYPDLEEYEQEELALHEDEMTHNKKIQASIAQTLKRQTEALGKKRKRSRRN
SRNADDLPESNDNENMNDSDVGKDSSSVDERTETEPRTCNTFGEQESQFPQNSASTDPDG
AGGENIQEVSIEISASSTPAWGTNAPQSHPRVGGKSPRSSRLASLVDHLGNSSGNNDEEV
SVFLKLDSLDEQTVPSLEKPYLVCKNPSMSVKMLCEHVALKTGLQVDEVELWLVSQPENS
ILEGERTADAAKDNLRLLGDEEILAELISSGADVTVCGHLVIAYRRKSLNPSVDSP
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggaaacagagaagcgctctcacgatgctcctcatgaagaggatgctgatgctgatgct
gatgctctgactatgatcatggacaactacaacggtggaagtgaacctgaatctgatgga
agcaattcatctagcagtgaggaggagcccgaggacgaatatatgcttttagacttgtca
gatctacaccagcaatttcaatgtgctatctgcctaggcatcattcgaaagacaagaact
gtaatggaatgcctgcatcgcttttgcaaagactgcattgacaaatccatgcgcctaggt
aacaatgaatgcccaacttgccgtacacattgtcctagccgacgctcactgagagatgac
ccaaactttgatgccttgattgctgctgtgtatccagatcttgaagagtatgagcaagag
gaattggcgttgcatgaagatgaaatgactcacaacaagaagatccaagcttccattgcc
cagactctgaaacggcaaacagaagcattgggtaagaaacggaagaggagtcggagaaac
tccagaaatgctgatgaccttcctgaatccaatgacaatgagaatatgaatgatagtgat
gtgggaaaggactcatcttctgttgatgagcggacagaaactgagccaagaacatgcaac
acttttggagaacaagaatcacaatttcctcagaattctgcttctactgatccagatgga
gctggtggtgaaaatattcaagaagtgagtatagaaatcagtgcatctagtacacctgcc
tggggaacaaatgctccacagagtcaccctcgagtcgggggtaagagtcccagaagcagt
cgcctcgccagtttggttgatcatcttggaaactcgtctggaaataatgacgaggaggtg
tctgtctttctcaagcttgactctttggatgagcaaacagtgccaagtttggagaagcca
taccttgtatgcaagaacccttccatgtcagtcaagatgctgtgcgagcatgttgcgctt
aaaactgggctgcaggtggatgaagttgaattatggttggtatcgcagccagaaaacagc
attttggagggtgaaagaactgctgatgcagccaaggataacttgcgtcttctaggagat
gaagaaattttggctgaactgatcagtagtggtgctgatgtgactgtctgtggtcatctg
gtcatcgcttacaggaggaagtcactgaacccttctgtggatagtccataa

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