Lotus japonicus: 130714249 Help Entry 130714249         CDS       T04348                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism lja  Lotus japonicus Pathway lja04142   Lysosome biogenesis lja04148   Efferocytosis Brite KEGG Orthology (KO) [BR:lja00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     130714249    04148 Efferocytosis     130714249  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lja04131]     130714249 Membrane trafficking [BR:lja04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     130714249 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TEX15 zf-HC5HC2H_2 AlaDh_PNT_N Peptidase_M85 Motif Other DBs NCBI-GeneID:  130714249 NCBI-ProteinID:  XP_057420125 LinkDB All DBs Position 4:16942432..16956678 Genome browser AA seq 991 aa AA seqDB search MVHSAYDSFELLTDCPSKIESVEPYGSKILLGCADGSLQIYAPVTEEEDAEELRKEAYAL EMTVNGFAKKPVMSMQVVESREMLLSLSESIAFHRLSTFETIAVITKAKGAHAFCWDERR GFLCFARQKRLCIFRHDGGRGFVEVKDFGVPDVVKSMCWCGENVCLGIRKEYMILNATNG ALSEVFTSGRIAPPLVVSLPSGELLLGKENIGVIVDQNGKLRPEGRICWSEAPAEVVIPK PYAIALLPRFVEIRSLRAPYPLIQTIVLRNVRHIRQSNNSVILVLENSVHGLFPVPLGVQ IVQLTAAGNFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHHLFDNCSYEEAMEHFLESQ VDITYVLSLYPSIILPKTTIVHEPEKFMDIFEDALCLSRGSSTMSDDMEPSPASHISESD ENAELESKKMSHNMLMALIKFLHKKRYSVIEKATAEGTEEVVLDAVGDNFASYNSSRHKK ITKGRGSTSISSVAREMASVLDTALLQALLLTGQSSLAEDLLGDLNYCDLKICEEILKEG GYLVALVELYKCNSMHREALELVHKLVKDGQSEIAHKFKPETIIEYLKPLCETDPTLVLE LSMLVLESNPTQTIELFLSGNIPAHMVNSYLKQHAPNLQATYLELMLAMNEDAVSGNLQN EMVQVYLSEVLDWQADLSSQGKWDEKVYSPKRNKLLSALESMSGYNPEALLKRLPSDALY EERAILLGKMNQHELTLSLYVHKLHVPELALSYCDRVYGSTHKPSVTSPSNIYLMLLQIY LNPRRTTKNYEKRITNLLSPRSTTLPRANSKILLKTRSRGSKKIASIDVAEDIKASLSST DSSKSDADTDEFPEGGTSIMLDEAIDLLSRRWDRINGAQALKLLPKETKLQNLLSFLGPL LRKSSEMYRNCSVVQSLRQSENLQVKDELYNKRKTVVKITGDDMCSLCHKKIGTSVFAIY PNGKTLVHFVCFRDSQSMKAVAKGSPLRKPF NT seq 2976 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcctacgattccttcgagcttctcaccgattgcccttcgaagatcgaa tccgtcgaaccgtacggttccaaaatcctcctcggatgcgccgacggatccctccaaatc tacgcgccggtgacggaggaggaggatgcggaggagctccggaaggaggcttacgcgctt gagatgacagtgaacggcttcgcgaagaagcctgtgatgtcaatgcaggtggtggaatcg agagagatgctcctctcgctctcagaatccatcgcatttcacaggctttccacgtttgaa accattgctgtcatcaccaaggccaagggcgcccatgctttctgctgggatgaacgcaga ggcttcttgtgcttcgccaggcagaagcggctctgtatcttccgacacgacggtggtaga gggtttgtggaggtgaaagactttggtgttcctgatgtggtgaagtcgatgtgttggtgc ggtgagaatgtatgcttgggcatcaggaaagagtatatgattctgaatgccacgaatggt gcactgtctgaggtttttacttccgggaggatagcaccacctttagttgtctcgcttcct tctggtgaacttcttcttggcaaggagaacattggcgtcattgtggaccaaaatggaaaa cttcgtccagaaggtaggatttgttggtcagaggccccagcagaagttgtaataccgaag ccatatgctatagcactgctgcctagatttgtggagattcgatctcttcgagctccatat ccactgatacaaacaatagttcttcgaaatgtacgccatattcgccaaagcaataattct gtgattcttgttttagaaaattctgttcacggcctttttcctgttcctcttggagtccag attgtacaattaacagctgctggtaactttgaagaagccttgtcattgtgcaagctcctt ccacctgaagattcaaatcttcgtgctgcaaaggagggttcaattcatataagatatgcc caccatctttttgacaattgcagctatgaggaggcaatggaacattttctcgagtctcaa gtagatataacttatgttctttctctctatccatccattatccttccaaagacaactatt gttcatgagccggagaagtttatggatatctttgaagatgctttatgtctctcccgaggt tcttcgactatgtcagatgatatggaaccctctccagcatcgcatatatcagaatctgat gaaaatgcagaacttgagtccaaaaaaatgagccataatatgcttatggctctcataaag tttttgcataagaagagatatagtgttattgagaaggccactgcagagggaactgaggaa gttgtcttagatgcagttggggataacttcgcatcctataacagtagtaggcataagaaa attaccaaggggcgtggtagtacatctattagttcagtagctcgggagatggcttcagta ttggatactgctctactccaggcattgctgcttactggacaatcttctttggctgaagat ttacttggagatcttaattactgtgatttgaaaatatgtgaagagatacttaaagaaggt ggctatcttgttgctttagtagaactttacaagtgcaactcaatgcaccgggaagctctg gaacttgttcataaattggttaaagacggccagtctgaaattgcacataagttcaagcct gagaccatcattgagtatctcaagccgctgtgtgaaacagaccccacacttgttcttgag ttgtccatgcttgttcttgaaagcaacccaacccaaactattgagctctttctatccgga aatattccagcacatatggtgaactcatatttgaagcaacatgctcccaacttgcaagcc acatacttggagctcatgcttgcaatgaatgaggacgctgtttctggaaatttgcaaaat gaaatggtacaagtctatctttctgaagtacttgattggcaggctgatttaagttcccag gggaaatgggacgagaaagtttactcccccaaaagaaataagttattgtctgccttagag agcatgtcaggatacaacccagaggctctgctgaaacgtcttccatcagatgctttatat gaagagcgtgcaatattgttgggaaaaatgaaccaacatgaactaacattatctttgtat gttcataagcttcatgttccagaactggcattgtcttattgtgatcgggtgtatggatct acgcataagccttctgtaacatctcccagcaacatatacctaatgcttttgcaaatttat ttgaatccacggaggacgaccaagaattatgaaaagagaatcacaaatctattatccccc aggagtacaacccttccaagagctaattcaaaaatcttattaaaaactagaagtcgagga tcaaagaaaattgcttccatagatgttgctgaggacataaaagctagtttgagtagcacg gacagtagcaagagtgatgctgacacagatgaatttcccgaaggaggtacttctatcatg cttgatgaggccattgatttgttgagccgcaggtgggatagaatcaatggagcccaggca cttaaacttttacctaaggaaactaaacttcagaacttgctttcatttcttggacccctt ctgagaaaatctagtgaaatgtatcgtaattgctcggtggtccagagcttgagacagagt gagaaccttcaggtgaaagatgaactctacaataagagaaaaacagttgtgaagattacc ggtgatgacatgtgttccttgtgccataagaaaatagggactagtgtttttgcaatctac ccgaatgggaaaactctagtgcattttgtctgcttccgagattctcaaagtatgaaagct gtagccaaagggtctccattgagaaaaccattttga

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