Lotus japonicus: 130714265
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Entry
130714265 CDS
T04348
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lja
Lotus japonicus
Pathway
lja00900
Terpenoid backbone biosynthesis
lja01100
Metabolic pathways
lja01110
Biosynthesis of secondary metabolites
Module
lja_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130714265
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lja01006
]
130714265
Enzymes [BR:
lja01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130714265
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130714265
2.5.1.29 geranylgeranyl diphosphate synthase
130714265
Prenyltransferases [BR:
lja01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130714265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
130714265
NCBI-ProteinID:
XP_057420147
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All DBs
Position
4:73604652..73607144
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AA seq
342 aa
AA seq
DB search
MAPFAIATLPSSYMCHIRKPRNIVFPIRCSTAAPSPSSVSIRAKAAHFDLKTYWASLMVE
INQKLDEAVLVKFPPKIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRFAAFPTACALE
MVHAASLIHDDLPCMDDSPSRRGQPSNHAIYGVDMAILAGDALFPLGFQHIVSHTPSDLV
PEPHLLRVIAEMARSVGSTGMAAGQFLDLEGGPNAVGFIQEKKFGEMGECSAVCGGLLAG
AEDDDIERLRRYGRAVGVLYSVVDDILEARENPEGGNDRKNKEKSYVKVYGVKKATEMAE
ELRDKAKEELDGFEKYGELVFPLYSFVDYAFDRSFSVGEASG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttgctatagcaacattgccctcttcatatatgtgccacatcagaaagcct
cgaaacattgtttttccaattcgatgctccacggctgctccttctccttcctctgtttcc
attcgggctaaagctgctcattttgatttgaagacatattgggcttccctgatggtggag
atcaatcagaagctggatgaagctgttctagttaagtttcctcctaagatatatgaagca
atgaggtattcagtccttgccaaaggtgccaagcgagccccgcctgttatgtgcatatct
gcttgtgagctctttggaggcagccgctttgctgccttccccactgcctgtgcccttgaa
atggttcatgcggcttcattgatacatgatgatcttccttgcatggatgactccccctca
cgccgtggccagccctcaaaccacgccatctatggtgttgatatggcaattcttgcgggt
gatgcgctctttcccctcggatttcagcatattgtttcccatactccctctgaccttgtg
cctgagccccacctccttcgtgtgattgctgagatggctcgatctgtaggctccactgga
atggctgcagggcagttcctggaccttgaaggggggcccaatgcagttggatttatacaa
gaaaaaaagtttggtgagatgggggagtgttctgctgtgtgtggaggattgttagctggt
gctgaagatgatgacatagagagactgaggaggtacgggagagctgttggagtattgtat
tcagttgtggatgatattttggaagcgagagagaatcctgagggaggtaatgacaggaaa
aacaaggagaagagttatgtaaaggtttatggtgtcaagaaagcaacagagatggctgaa
gagcttagagataaagctaaggaagaattggatggatttgagaagtatggggagctagtc
tttcctctctacagttttgtggattatgcttttgatagaagtttcagtgttggtgaagct
agtgggtga
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