KEGG   Lotus japonicus: 130714580
Entry
130714580         CDS       T04348                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
lja  Lotus japonicus
Pathway
lja03010  Ribosome
lja04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    130714580
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130714580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lja03011]
    130714580
   04121 Ubiquitin system [BR:lja04121]
    130714580
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    130714580
Ribosome [BR:lja03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    130714580
  Archaea
    130714580
Ubiquitin system [BR:lja04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   130714580
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130714580
  Exosomal proteins of colorectal cancer cells
   130714580
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Ubiquitin_5 Thioredox_PDIA6_C Fer2_3
Other DBs
NCBI-GeneID: 130714580
NCBI-ProteinID: XP_057420472
UniProt: I3TAN7
LinkDB
Position
4:76207990..76208681
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPTA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgatcaccctcgaggtggagtcttcc
gacacaatcgacaatgtgaaagccaagatccaggacaaggagggaattcccccggaccag
cagaggttgatcttcgccggaaagcaactcgaagacggccgcaccctcgccgactacaac
atccagaaggagtccactctccacctcgtcctccgtctccgcggtggcgccaagaagagg
aagaagaagacctacactaagcccaagaagatcaagcacaagcacaggaaggtgaagctc
gctgttctccagttctacaaggtggatgactccgggaaggttcagaggctgaggaaggag
tgccccaatgctgagtgcggcgccgggactttcatggcgaaccactttgatcgtcactac
tgtggcaagtgtgggctcacctatgtctaccagaagcccactgcttag

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