KEGG   Lotus japonicus: 130714695
Entry
130714695         CDS       T04348                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130714695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130714695
   03041 Spliceosome [BR:lja03041]
    130714695
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130714695
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130714695
Spliceosome [BR:lja03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    130714695
SSDB
Motif
Pfam: RRM_1 RRM_7 CMS1
Other DBs
NCBI-GeneID: 130714695
NCBI-ProteinID: XP_057420602
LinkDB
Position
4:8332343..8334712
AA seq 365 aa
MDFPKKRKTEENGDAVSPLPPTDAVASPTITLAAEDIRKILQPFSQDQLLELLQSASLRH
PDVLDSIRSVADRDTAVRKLFVRGLACETTTETLRSVFSAYGDLDEAIVIFDKSTGRSKG
YGFVVFKHIDGAILALKDPSKKIDGRMTVTQLAAARSGGSSGDVSARKVFVGNVPFEIPS
ERLLDEFLKFGEVEEGPLGFDKASGKARGFAFFVYKTEEGARASLAEPLKTIDGHQVICK
LAVDNKKPKPGGAHNASGFPVETPQPSSMHAPGPNTMMPPQYGAGNPYGQPYGNPVPSGG
GYAPGIGGGGGAPQYGGPGPVPVSGARFPPASGGGYPDGSQYGYPSQPMPMQRPPTGGMY
QPPYY
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggacttccccaagaagcgcaaaacggaggagaacggcgacgccgtttctccacttcca
ccaaccgacgccgtcgcatccccaaccatcaccctcgccgcagaagatatccgcaagatc
ctccaacccttctcccaggaccaactcctggagcttctccaatccgcctccctccgtcac
cccgacgtactcgactccatccgctccgtcgccgaccgcgacaccgccgtccgaaaactc
ttcgtccgcggcctcgcctgcgaaaccaccaccgagacgctccgcagcgtcttctctgcc
tacggcgacctcgacgaagcgattgtcatcttcgataaatccaccggcaggtccaagggt
tatggcttcgtcgtgttcaagcatattgacggcgcaattcttgctctcaaggacccgagc
aagaagatcgacgggaggatgacggtgacgcagctggcggcggctagatcaggtggctcc
tccggtgatgtttccgctcgtaaggttttcgtcgggaatgttccgtttgagattccatcg
gagaggttgttggatgagtttctcaagtttggtgaggttgaagagggtccgttagggttt
gataaagcgagtggcaaggcaagaggcttcgcgttcttcgtgtataagactgaggaaggt
gctagagcttcgcttgcggagcctctgaagacaattgatgggcaccaagtgatttgcaag
ttggctgtggataacaagaagcctaagcctggtggggcacacaatgcttcggggtttccg
gtggagacgccgcagccttcttcaatgcacgctcctggccctaataccatgatgccgccg
cagtacggtgctgggaatccttatgggcagccgtatggtaatcctgttccatctggtggt
gggtatgcgcctggaattggtggtggtggtggtgccccgcagtatggtgggcctgggccg
gtgccggtttctggtgcaaggtttcctccagcttctggcggaggatacccagatgggtcg
cagtatggttacccctcgcagcccatgcctatgcaaagacctcctactggtggaatgtac
caaccgccttattattga

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