Lotus japonicus: 130714731
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Entry
130714731 CDS
T04348
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130714731
Membrane trafficking [BR:
lja04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
130714731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
V-SNARE
MREG
BLOC1_2
JHD
VBS_C3G9
DUF7605
NAAA-beta
DUF496
MCPsignal
Prominin
Occludin_ELL
Niban2
TMEM120A-B
DUF6988
CYP38_PsbQ-like
MADF_DNA_bdg
Seryl_tRNA_N
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
130714731
NCBI-ProteinID:
XP_057420650
LinkDB
All DBs
Position
4:complement(44475636..44480254)
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AA seq
262 aa
AA seq
DB search
MDQLSAISEDLAEIDGHIADNFRALANGFQKLEKIKDSSRKSRQLEELTEKMRDCKRLIK
DFDKEVKTLEASFDRETNKMLNEKKQSMIKELNSYVALKKQYASSIENKRVELFEGPNEG
YAEENVLLASSMTNEQLFDHGHQMMDETDQAIERGKKVVLETVNVGTETAAALKAQTEQM
SRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVITIIIVKLVHPNNKD
IRDIPGLAPPVMNRRLLWSHHR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttgtcggcgatcagcgaggacctggcggagatcgacggacacatcgccgat
aatttccgcgcattagcaaatgggtttcagaagttggagaagattaaggattccagcagg
aagagccgccagttggaagagctcaccgagaaaatgcgagactgcaaacggcttattaaa
gattttgataaagaagtcaaaactttggaggcgagctttgacagagaaaccaacaaaatg
ttgaatgagaaaaagcagtcaatgatcaaagagttaaattcgtatgttgctttgaaaaag
caatatgcttcaagtattgagaataagcgagttgagctctttgaggggcccaatgaaggt
tatgctgaggaaaatgtcttgctagcttcttcaatgacaaatgaacagctttttgatcat
gggcatcagatgatggatgagacagatcaagccattgagaggggaaagaaggttgttcta
gagacagtaaatgttggtacagagactgcagcagctcttaaggctcagacggaacaaatg
agcagagttgtcaatgagctggattctatccatttctctataaagaaagcctctaaattg
gtcaaggaaatcggtaggcaggttgcaactgataagtgtatcatggcattacttttcctt
attgtcattggagtaattaccatcatcattgtaaagcttgtgcacccaaacaacaaggac
attcgcgacattccaggattagcccctccagtcatgaaccgaagactgctctggagtcat
cacagatga
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