Lotus japonicus: 130715088
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Entry
130715088 CDS
T04348
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130715088
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130715088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
130715088
NCBI-ProteinID:
XP_057421109
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Position
4:complement(76444642..76448879)
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AA seq
686 aa
AA seq
DB search
MATVASPADQASDLLQKLSLETQAKPLEIPEPTKKVSGNQYGTVDSGNAANGQIPSYERS
VTPVLQDFIDPTMCYVPNGYASTAYYYGGESMGAYYYGGYDGTGNEWDDYSRYVNQEGLD
MTSGVYGDNGSLLYHHGYGYAPYGPYSPAGSPVPTMGNDGQLYGPQHYQYPPYFQPLTPT
SAPFTPTSVLPQGEISTSVAADQKPLPVDAANGNSNTVPSGGSPKGRGPASGYQDPRFGF
DGARSPNPWLDAPLFSDGQLRPVSSTTNTSSISGGNNTASRNQSYRPNSQFMGLHHPRPM
PAMGATHGFINRMYPNKLYGQYGNTVRSGMGYGTQYDSRSNGRAWLAVDNKYKTRGRSGG
YFGYGNENADGLNELNRGPRAKGGKNQKGFAPTILAVKGQNLPANLTTEEEKDKTSNIPD
REQYNKADFSEEYTDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKLDAAYQEAQQKPG
GCPVFLFFSVNTSGQFVGLAEMTGPVDFNKSLEYWQQDKWNGCFPLKWHIVKDVPNNLLR
HITLDNNENKPVTNSRDTQEIMLEPGLKLVKIFKEYSSKTCILDDFGFYEARQKTILEKK
AKQQFPKQVWEGKPTEEKIEVNGEVNAPKSEVTSELLKESTLSEKDSEDPKLLDNGTVAK
PGDAPKGAKPVVSESKIVVNGVANGC
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttgctagtcctgctgatcaagcatcagatttgctgcagaagttatcgttg
gaaactcaggccaagcccttggaaattccggagccaaccaagaaggtctctgggaatcaa
tatggaacggttgattcgggtaatgctgctaatggtcagatcccatcatatgaacggtct
gtaacacctgtgttgcaggattttattgatcccaccatgtgttacgtgccaaatggttat
gcatccactgcttattattatggtggtgagtctatgggtgcttattattatggtggttat
gatgggactggtaatgagtgggatgattactctagatatgtgaatcaggaaggacttgac
atgacttctggagtttatggtgataatgggtctcttttgtatcaccatggatatgggtat
gcaccctacggtccttattcaccagcagggtccccagttccaaccatggggaatgatggt
cagttgtatgggcctcaacactaccagtatcctccctatttccagccactgactccaacc
agtgcgccattcacaccaacttcagtccttcctcaaggcgagatttcaacctctgtagct
gctgatcaaaagcctcttcctgtggatgcagctaatggaaactccaatactgtccctagt
ggtggtagtccaaaaggtcgcggccctgcttctggttatcaggatccaagatttggtttt
gatggagctcgttcacctaacccatggctagatgccccactattttcagacgggcagctt
agacctgtgagtagcacaaccaacacctcttcaatatcaggtggcaacaatactgcttca
aggaaccagtcttaccgcccaaattctcaatttatgggcttgcatcatccgagaccaatg
cctgccatgggtgcaacacatggcttcattaaccggatgtatccgaacaaattatatggt
cagtatggaaacactgtcaggtctggaatgggttatggaacacagtatgattctcgctca
aatggacgggcatggctagctgttgacaacaaatacaaaaccaggggaagaagtggtggt
tactttggctatggcaatgagaatgctgatggtttgaatgagctgaacaggggacctagg
gccaagggtggtaagaaccaaaagggttttgcaccaactattctggcagtcaaagggcaa
aatttgcctgcaaatctgaccacagaagaggagaaagacaagaccagtaatattccagac
cgtgaacaatataacaaggctgatttctctgaagaatacactgatgccaaattttttgtc
atcaagtcttatagcgaggatgatatccataaaagcatcaagtataacgtttgggcaagc
acacaaaatggtaacaaaaagcttgatgctgcatatcaggaggcccagcagaaacctggt
ggctgccctgtcttcctgttcttctcggttaataccagtggacaatttgttgggcttgct
gagatgactggtccagttgattttaacaagagtctggagtattggcagcaggacaagtgg
aatggttgtttccctctgaagtggcacattgtgaaggatgttcccaacaatttgttgagg
cacattaccttggacaacaatgagaacaaacctgtcaccaacagtagggatacacaagag
ataatgctggagccaggtctgaaattggtcaaaattttcaaggaatatagcagcaagaca
tgcattctggatgattttggattctatgaggctcgtcagaagacaatcttggagaagaaa
gcaaagcaacaattcccaaagcaggtttgggaagggaaacctactgaggagaagatagag
gtcaacggggaggttaatgctccaaaatctgaagttacctcggaattgctgaaggagtct
accctgtctgagaaggatagtgaggatcccaaactcttggacaatggaactgtggcaaaa
cctggagatgccccaaagggtgctaaaccagttgtatctgagagtaagattgtagtcaat
ggtgttgctaatggttgctaa
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