Lotus japonicus: 130715523
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Entry
130715523 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130715523 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130715523
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130715523
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
130715523
NCBI-ProteinID:
XP_057421612
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Position
4:34427862..34436798
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AA seq
736 aa
AA seq
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MKMVDKKSKRFFFLWWFGITVQLCFLLCSCAEKTSLRNQLFPCIPFICRRGLKDISSTKS
TSIHSGLNLNTDNHQQLVVDNGIVSVTLSRPEGYVIGISYNEIDNILETENEEKDRGYFD
VVWNEPGKASSFQRIHGTNFSVIAADGDSVEVSFLKTWTSSDSDVPINIDIRYIFRSGDS
GFYSYLIFDRPEGWPAVEVDQVRFVYKLKKDRFNYMAVSDDRRRMMPTMKDRETGQILAY
PEAVRLTKPTNPEFRGEVDDKYQYSCENTDNGVHGWISTLDSDDDDAPTMGFWMITPSNE
FRNAGPIKQDLTSHVGPITLSMFVSTHYAGKEVTMAFQEGETYKKVFGPVFVYLNSASID
DDDDTLSLWSDANQQLSIEVQSWPYDFPQSQDFFPPSQRGAVTGRLLVQDWSIKGGRYQY
SDNAYVGLALPGEAGSWQKESKGYQFWTRPDTNGYFTINNVVPGDYNLYAWVPGFIGDYK
RNATITITPGKLSFTLLLVWSKTSNNLVNSTTYNYLIEPVGEIINLSYVVYNPPRNGPTI
WEIGIPDRSAAEFHVPDPYPMLMNKLYTEKRKDKLRQYGLWERYTDLYPRDDLVYIVGDS
KYRKDWFYAQVTRHMGNETYEPTTWQIIFEHRKDIFIGNYTLQVALASASDAELQVRFND
PSINPPHFTTGHIGGDSAIARHGIHGLHRLFSIDVPSNLLMKGKNTIYLRQSRAKNAFQG
VMYDYIRLERPPNPNT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtggataagaaaagcaaacgatttttcttcctttggtggtttggtataact
gtgcagctctgtttcttgctctgttcctgtgctgagaagacatcattaagaaaccaatta
tttccatgcattccgttcatctgcagaagaggtttaaaggacatcagcagcacaaaatca
acatctattcattctggactcaatcttaatacagataaccatcagcagttggtggttgat
aatggcattgtttccgtcactttgtcaagacctgaggggtacgtcattggaatatcttat
aatgaaattgacaacatccttgaaactgaaaacgaagaaaaagatagagggtactttgac
gtcgtttggaatgagccagggaaagctagtagctttcagagaatccatgggacaaatttt
tctgttatagcagctgatggtgattccgtagaggtttcatttctaaagacatggacatcg
agtgattcagatgttcccataaacatagacataagatacatttttcgaagtggagattca
ggattttattcgtacttaatattcgatcgccctgaaggatggccagctgtggaggttgat
caagttaggtttgtttacaaactcaagaaagataggttcaactacatggctgtatcagat
gacaggagaagaatgatgccaacaatgaaagatagagaaactggtcaaattcttgcttac
cctgaagctgttcgtttaaccaaaccaaccaacccagaattcagaggagaggtggatgat
aaatatcaatactcatgtgagaacacagacaacggtgttcacggatggattagtactctt
gattctgatgatgatgatgcacccaccatgggtttctggatgataacaccaagtaacgag
ttccgcaatgctggcccaatcaagcaagatcttacttctcatgttggccccatcacactc
tctatgtttgtgagcactcactatgctgggaaggaggtaaccatggcatttcaagaaggt
gaaacttataagaaggtttttggccctgtatttgtgtaccttaactctgcttcaatcgat
gatgatgatgatacactatccctctggtcagatgctaaccagcagttatccattgaagtc
cagagctggccttatgatttccctcaatcacaagatttctttccacccagtcaacgagga
gcagtaacaggaagattgctagtccaagattggtcaattaaaggagggagatatcaatat
tctgacaatgcgtatgttggtctagctttgcctggagaagcaggatcatggcagaaagaa
agcaagggctatcagttctggactcgacctgacactaatggatacttcacaataaataat
gttgtgccaggtgattataatttgtatgcttgggtccctggcttcattggtgattacaaa
cgtaatgctacaatcaccatcacaccaggtaaattatcttttactctcttgttggtttgg
tctaaaactagtaataacttagtgaattcaacaacttacaattacttgattgaacctgta
ggtgaaataatcaatttgagttacgtagtatataatcctccaagaaatggaccaacaatt
tgggaaattggtatcccagatcgctcagctgctgaatttcatgtaccagacccttaccct
atgctcatgaacaaattatacaccgaaaaacgcaaagacaagcttaggcaatatgggttg
tgggagcgttacaccgatttgtatcctagagatgaccttgtttacattgttggtgatagc
aagtatagaaaggattggttttatgctcaagttacaagacacatgggaaatgaaacgtat
gagccaacaacatggcagattatatttgaacatcgtaaagacatatttatcggaaactac
acactccaagtggctctggctagtgcttctgatgctgaactacaggtccggttcaatgac
cctagcataaatccaccccactttacaacagggcacataggaggtgacagtgctatagca
agacatggcatccatggattgcataggctgttcagcattgatgtaccaagtaatcttctt
atgaagggaaagaacaccatctatctgaggcagtcaagagccaaaaatgctttccaagga
gttatgtatgattatatccgtttggaaagacctccaaatccaaacacttga
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