Lotus japonicus: 130715723
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Entry
130715723 CDS
T04348
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
130715723
03021 Transcription machinery [BR:
lja03021
]
130715723
Transcription factors [BR:
lja03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
130715723
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
130715723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
KRAB
Motif
Other DBs
NCBI-GeneID:
130715723
NCBI-ProteinID:
XP_057421825
LinkDB
All DBs
Position
4:80757212..80759865
Genome browser
AA seq
468 aa
AA seq
DB search
MADTVAVAEVPPKRSRGGRKALKEKTPSTNEANIIAGKVSESSASPISKNQQSKQQSFEK
DLLEMQEKMQQMRLEKEKTEELLKARDELLKQKEEELENRGREQEKLQVELKKLQKLKEF
KPTMNLPMLKEKEQDKKEKKKKNGGSETKRPSPPYILWMKDQWSEIKKSNPEAEFKEISN
MLGAKWKTVSAEEKKPYEERYHAEKEAYLLVTAKEKREIEAMKLLEEEHKQKTAMELLEQ
YMQFKQETEKEGKKNKKEKDPLKPKHPMSAYFLFTNERRAALLAENMKVLEVPKVTAEEW
KNMTEEQKRPYEEMAKKNKENYALEMEAYKQKKDEEAANLMKEEEEHMKLQKQEALQLLK
KKEKTEIIIKKTKQKKKQNKEDKISDPNRPKRPPSSFLIFRNEARKSLQEERPGVSNPTL
NALVSLKWKELSEEEKQLWNGKASEAMEAYKKELEEYNKSLASTEATN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacagttgcagttgctgaagtaccaccaaagaggtccaggggtggcagaaag
gcgctgaaggagaaaaccccgtcaacgaacgaggcaaacatcatagctgggaaggtttct
gaatcctctgcctctccaatttcgaagaatcagcagtcgaagcagcaatcattcgagaag
gacttgcttgagatgcaggagaagatgcagcagatgcgtctcgagaaggagaagactgag
gagctcttgaaggccagggatgagctattgaaacagaaggaggaagagcttgaaaatcgt
ggccgcgagcaggagaagcttcaggttgagctgaagaaattgcagaagctgaaggagttc
aaacctaccatgaatttgcctatgctgaaagagaaggagcaggataagaaggagaagaag
aagaagaatgggggctctgagacaaaaaggccttctccaccttacattttatggatgaaa
gaccaatggagtgagattaagaaatcgaaccccgaggccgaatttaaggaaatttcaaac
atgcttggggctaaatggaagacagttagtgcagaagagaagaagccttatgaggagaga
taccatgcagaaaaagaggcttacctgctggtgactgcaaaggaaaaacgtgagattgag
gcaatgaagctcttggaagaggagcacaagcagaagactgctatggaattgcttgaacag
tatatgcagtttaaacaagagacagagaaagagggcaagaagaacaagaaagagaaggat
ccattgaaaccaaagcaccctatgtcagcttatttcttgttcactaatgaaagaagggca
gctcttcttgctgagaacatgaaggtcttggaggttcccaaggtcacagctgaagagtgg
aaaaacatgacagaagaacaaaagaggccttatgaagagatggcaaagaagaacaaggag
aattatgctctggaaatggaggcttataagcagaaaaaggatgaggaggctgctaatctc
atgaaggaagaggaggagcatatgaaacttcagaaacaggaagccttgcaactgctgaag
aagaaggagaaaactgaaatcattatcaagaaaacaaaacagaagaagaaacagaacaag
gaggataagatttctgatccaaacaggcctaagagacctccatcctcattcctcatattc
agaaatgaagcaaggaaaagcttacaggaggaacgaccaggagtcagtaaccccaccctc
aacgcacttgtttccttgaagtggaaggaactgagtgaggaagaaaaacaattgtggaat
ggcaaagcatctgaagcaatggaagcatacaagaaggaattggaggaatacaacaaatcc
cttgcaagcactgaagcaacaaactga
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