Lotus japonicus: 130715728
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Entry
130715728 CDS
T04348
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
lja
Lotus japonicus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
nSTAND3
AAA_14
AAA_7
AAA_25
Mg_chelatase
NBD_SMAX1
AAA_18
IstB_IS21
RuvB_N
NACHT
PhoH
ResIII
Zeta_toxin
RsgA_GTPase
AAA_33
AAA_24
Torsin
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
130715728
NCBI-ProteinID:
XP_057421830
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All DBs
Position
1:complement(78660421..78666856)
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AA seq
966 aa
AA seq
DB search
MQVSSPSMNSCFGNFTPNFSRQFQSEPCSTATTVVATTSYPLRAKLLFSRAGPSSRCKLN
NSLSSLPSQRKACSFTSPALSPANSRKTRKRRAFTVSAVFERFTERAIKAIVFSQREAKA
LGSELVYAQHLLLGLVAEEDRSSDGFLASGVTIEKARDAVRSIWHRNGSNPAPPRGVGDG
DDKGGSVYATNLPFSVGAKRVFEAAVEYSKSLGHKFVAPEHIAVALVKVDDGSTSRVLYR
LGTNANHLAAVAFSRLQKELAKDGREPKMLSKGANSISGKDSNAGSSSTTADKSPLSQFC
VDLTARASEGRIDPVIGREVEVQRIIQILCRKTKSNPILLGDAGVGKTAIAEGLAIRIAK
ADVAPFLLTKRVMSLDVAQLMAGAKERGELEERVTKLLKEIIKSGDVILFIDEVHTLVQS
GTVGKGNKGSGLDIANLLKPALGRGQLQCIASTTIDEYRIHFEKDKALARRFQPVWVDEP
SEDDAVKILMGLREKYEAYHKCRYTEDAIEAAVHLSARYIVDRYLPDKAIDLIDEAGSRA
RIVAFRTKKEKETCILSKFPADYWQEIRTVQSMHEMETKLKYYGASSIDDTSELILDSYL
PNAANDNEPIEVGTDDIAAVASLWSGIPVQQLTADERILLLDLDNQLRKRVIGQEEAVTA
ISKAVKRSRVGLKDPSRPIATMLFCGPTGVGKTELAKSLAASYFGSEAAMVRLDMSEYME
RHTVSKLIGSPPGYVGYGEGGILTEAIRRKPFTVLLLDEIEKAHPDIFNILLQLIEDGQL
TDSQGRKVSFKNALVVMTSNVGSSAIAKGRHNSIGFLVPDDKSTSYNGLKSMVIEELRTY
FRPELLNRIDEIVVFQSLEKSQLLEILDVLLQDVKKRIMSLGIDLEVSESVKNLVCKEGY
NPTYGARPLKRAITSLIEDPLSEAFLCGKCKQGDTVLIDLDVNGNLLVTNQLDRIVNLSD
TSHPCN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttcatccccatcaatgaactcatgcttcggaaatttcactcccaacttttcc
cggcaattccaatcagaaccatgctcaaccgccaccaccgtggtggcaaccacctcctac
ccacttcgcgcaaagctgctattctcacgcgccggtccatcatcacgctgtaaactcaac
aactccctctcgtctctaccttctcagagaaaagcctgctcctttacctcgccggcgtta
tcgccggcaaacagcagaaagacgaggaagcgaagagcgttcaccgtctctgcggttttc
gagcggttcacggagagagcgataaaggctatagtgttttcccaaagggaagctaaagct
cttgggagtgaactggtttacgctcagcatctgttgttgggtcttgtagctgaagaggat
cgttcttctgatgggtttcttgcgtctggtgttactattgagaaggctcgtgatgctgtc
agaagcatttggcatcggaatggttcaaaccctgctcccccacgtggtgttggtgatggt
gatgataagggaggttctgtttatgctacaaatcttccattttcggttggggcgaagcgg
gtgtttgaggctgcggttgagtattcgaagtctttggggcataaattcgttgctcctgag
catattgcagttgctttggtcaaagttgatgatggaagtactagtagggtactttacaga
ctagggacaaatgcaaaccacttggcagctgtggcgttctccaggctgcaaaaggagctt
gctaaagatggtagagaaccaaaaatgttgtccaaaggggctaattctatttcaggaaaa
gattctaatgcaggatcctcctccacaacagcagataagagtcctctatcacaattctgt
gtggatcttactgcccgcgcgagtgaaggaagaattgatccagttattggccgagaagtt
gaagttcagagaattattcaaatactatgccgaaaaaccaaaagtaatcccattcttctt
ggtgacgctggcgttgggaaaacagctattgctgagggactggcaatccgtattgctaag
gctgatgttgctccttttttattgacaaagcgtgtcatgtccttggacgtagcacaatta
atggctggggcaaaagagagaggagagctagaggaacgtgttacaaaattactcaaagag
ataataaagtcaggtgatgtcattcttttcattgatgaagtccatacacttgttcaatca
gggaccgttgggaaaggaaataagggatctggtctggacattgctaatttacttaaacct
gcacttggaagaggtcaacttcagtgtattgcgtctaccacaatagatgaatacaggatt
cattttgaaaaggataaggctttggcacggaggtttcagcctgtctgggttgatgagccg
agtgaggatgatgcagttaagatacttatgggtctgcgtgagaaatatgaggcttaccac
aaatgcagatatacagaagatgccatagaagctgcggtacatttatcagcaagatacata
gttgatagatatctacctgataaagctattgacctcatagatgaagcaggaagcagggct
cgtattgtagcttttaggacgaaaaaagaaaaagaaacttgcatactctccaagttccca
gctgattactggcaagaaattagaactgttcagtccatgcatgaaatggagaccaagctt
aaatactatggcgcatctagcattgatgatacgagtgaactcatacttgactcgtattta
cctaatgcagcaaatgataatgaaccaatagaagttgggacagatgatattgcagctgtt
gcttccctctggtcaggaattcctgttcagcagctcactgctgatgaaagaattcttctg
ttagatcttgataatcaacttcggaaacgcgtgattggacaagaggaggctgttactgca
atttcgaaagctgtgaagagatcccgggttggccttaaggatcccagtagacccattgct
acgatgctattctgtggcccaactggggttgggaaaacagaactcgcaaaatccttggcg
gcgtcttacttcggatcggaagcagccatggttcgtttagacatgagtgagtatatggaa
cggcatacagtgagcaaattgataggatctcccccaggttatgttggttatggagagggg
gggattttaaccgaagctattcgacgaaaaccatttacagtgctattgcttgatgaaata
gagaaggctcatccagatattttcaacattcttcttcagttgatagaagatggtcaactt
actgattctcagggtaggaaagtttcatttaaaaatgcattggtggtgatgacttcaaat
gtggggtctagtgccattgctaagggtcgacacaactccataggtttcttggttccagat
gacaaatcaacctcatataatggtttgaaatcgatggtaattgaagaactgaggacatat
tttcgtccagaattgctcaacaggatagatgaaattgtagtctttcaatcccttgaaaag
tcacagttgcttgagatattggatgttctgctgcaagacgtaaagaaaaggataatgtcc
ctaggaattgatctagaagtgtctgaatcagtcaagaaccttgtatgcaaggaagggtat
aacccaacatatggtgcacggcctcttaagagggccattacatcactaattgaagatcca
ttgagtgaagcattcctctgtggaaagtgcaagcaaggtgacactgtcctcattgatttg
gatgttaatggtaacctccttgttacaaatcagcttgatcgaatagtcaacttatctgac
acaagccacccctgtaattaa
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