Lotus japonicus: 130715936
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Entry
130715936 CDS
T04348
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
lja
Lotus japonicus
Pathway
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130715936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130715936
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
130715936
FA (Fanconi anemia) pathway
130715936
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF371
Motif
Other DBs
NCBI-GeneID:
130715936
NCBI-ProteinID:
XP_057422076
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Position
4:complement(79441567..79446653)
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AA seq
737 aa
AA seq
DB search
MHIRRLQLDFDSDEEQADVPPQPHKPTHQAPNPTNSPPEPVIISDEDFVDVSDDPSPPSP
PPAPVPQPHAPGCPVSYFLRRLGLGLKREWLADCLRALQGSVRGFEGLDVAAHAKLCFEQ
FLFADMNFCGGGVLPANVDSMHLDVLPGPYVLQVDEILNMSCPLRGRYQKANPGVKRCLK
LSMTDGVQRVFGMEYRPIQALDVCAPSGLKVSISNVKVRRGLLMLDPETVQIKILGGLVE
QLDAARQRLVKELNKPPRGTRTKNGVLPPLSTRATLAAWPSSRVDDPGHTAPMLHSTDSV
HTNNQATGAGLSMPHTGHRLTSEDTLPMGEQNAASNSIPHTVSNAEARNMDVHRGTYPVS
SDNSMGNQFPSSFARAEVHVDTPYITRQNSVGNQSSHAHSNVAATHGDTIHVTRESSVAT
MCSPIAENVETDKYRNRIPVTTITDSTPLRGSSSTVSTTDDILMGDASDHPLILSPEPGN
IIRESSVGNQSSHVHSNVAVADKDNVHVTWESSVATKCSPIAENVVTNHDKIPVITISDN
VPLRGSSAVSNTDDVLMVDAASDHPLMMSGDREVPFTYLASLSAKWAAMKEKSRLVQGKI
KCFLTGVKGFQYKKRTTYELQAYVDDGSLISEIIIDHDVVQKGIGYSPQEVTAALSSTDM
KTVQNMKETMRKFQAFLANFEGIIRVEFNRKSPIPLALEMNQGCPQSDAWLLMRRLKSLD
PAQVQNHSPLDPIYLSP
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcacatccgccgtctccagctcgacttcgactccgacgaagagcaagccgatgttccg
cctcagccacacaaacccactcatcaagctccgaaccctaccaattcccccccggaacca
gttataatctccgatgaggacttcgtcgacgtctccgatgacccatcgccgccatcccca
ccacctgcgccggttccccaacctcacgctcccggctgtcccgtcagctattttctccgc
cgccttggattgggcctgaagcgagagtggctggctgattgtcttcgcgcgctccaaggc
tccgtgaggggattcgaagggctcgatgtggccgcacatgccaagctttgtttcgagcag
tttctgtttgctgatatgaacttctgtggtggcggcgtgcttcctgcgaatgtggattcc
atgcatctcgatgttctccctggtccctatgtattgcaggttgatgaaatactcaatatg
agttgtcctctacgaggcagatatcagaaagccaatcctggagttaaaaggtgcctgaag
ttgtcaatgactgatggtgttcagagagtctttggaatggaatacaggcctattcaagct
cttgacgtttgtgccccttctggtttaaaggtttctatctctaatgtaaaggtacgtcgt
ggacttttgatgctggaccctgaaaccgttcaaattaaaattttggggggattagttgag
cagctggatgcagcacgacagcggttggttaaggaattaaataagccacctagggggaca
agaaccaaaaatggagtgcttcctcctttgtctactagagcaactcttgctgcatggcct
tcaagtagagttgatgatcctgggcacactgccccgatgttgcacagtaccgattctgtc
cacacaaacaaccaagcaacaggtgctggcctgagcatgcctcacactggtcaccgctta
acatctgaagatactctgcccatgggtgaacaaaatgctgcttccaattcaatacctcac
acggtttcaaatgctgaggccaggaatatggatgtgcataggggtacctatcctgtgtcc
agtgataattctatgggtaaccagtttccttctagttttgcaagggctgaggtgcatgta
gatactccttatatcactaggcaaaattctgttggcaaccagtcttctcatgcacactca
aatgttgctgcgacacatggagatactattcatgtaacaagagaaagttctgtggctact
atgtgctctcctattgctgaaaatgttgagactgacaagtatagaaacagaattcctgta
accacaataactgatagtactcctctgagaggatcctcctctactgtttcaacaactgat
gatatcctgatgggtgatgccagtgaccatccactcatactgtccccagaacctggtaat
atcatcagggaaagttctgttggcaaccaatcttcacacgtgcattcaaatgttgcagtc
gcagacaaagataatgttcatgtaacatgggaaagttctgtggctactaagtgctccccc
attgctgaaaatgttgtgacaaaccatgataaaattcctgtaattacaatttcagacaat
gttcctctaagaggatcctccgctgtttcaaacactgacgatgtcctgatggttgatgct
gccagtgaccatccactcatgatgtctggtgatcgagaagttccttttacatacttagct
agtttatcagccaaatgggctgcaatgaaagagaaatctcgtctggttcagggtaaaatt
aagtgctttttgaccggtgtaaaaggattccagtataagaaaaggacgacatatgagctt
caggcatatgtagatgatggtagccttatttctgaaattatcattgatcatgatgttgta
caaaaaggaattggttattctcctcaggaggtcactgcggctctttcttctactgacatg
aaaacagtccaaaacatgaaggagacaatgcgtaaattccaagcttttttggcaaacttt
gagggaataattcgagtagaattcaataggaaatctcccattccacttgccctagagatg
aatcaaggctgtcctcaatctgatgcatggttactcatgagaaggctgaagtctcttgac
cctgcacaagttcaaaatcattctcctttggatccaatttatttatccccgtaa
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