KEGG   Lotus japonicus: 130716025
Entry
130716025         CDS       T04348                                 
Name
(RefSeq) ras-related protein Rab5-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
lja  Lotus japonicus
Pathway
lja04144  Endocytosis
lja04145  Phagosome
lja04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130716025
   04145 Phagosome
    130716025
   04148 Efferocytosis
    130716025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lja04131]
    130716025
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    130716025
   04031 GTP-binding proteins [BR:lja04031]
    130716025
Membrane trafficking [BR:lja04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    130716025
 Endosome - Lysosome transport
    130716025
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130716025
  Exosomal proteins of other body fluids (saliva and urine)
   130716025
  Exosomal proteins of colorectal cancer cells
   130716025
  Exosomal proteins of bladder cancer cells
   130716025
GTP-binding proteins [BR:lja04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    130716025
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase TsaE MMR_HSR1 ATPase AAA_16 SRPRB PduV-EutP AAA_24 NACHT AAA_5 AAA_22
Other DBs
NCBI-GeneID: 130716025
NCBI-ProteinID: XP_057422179
LinkDB
Position
4:complement(82203551..82206375)
AA seq 198 aa
MARTGNKSLQAKLVLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVK
FDIWDTAGQERYHSLAPMYYRGAASAIVVYDITSMESFVRAKKWVREVQRQANPNLIMFL
VANKADLEDERKVRNEDGEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQT
GIKLQSRPQERRRMFCCA
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcgaggaccggaaacaagagtttacaagccaaactggtgcttcttggagacatggga
acagggaagacaagcttggttcttagatttgtcaaaggccaattttctgagtaccaggaa
tcaacaattggagcagcattcttcactcaggttttgtctttgaatgaagccacggtgaag
tttgatatatgggacactgcagggcaagaacgataccacagtttggctcctatgtactat
cgtggtgctgcttctgctatagttgtctatgacattacaagcatggaatcttttgtgaga
gcaaagaagtgggttcgagaagtgcaaagacaagcaaatccaaatttgatcatgtttttg
gtggctaacaaggctgatttggaagatgagagaaaagtcagaaatgaggatggtgaggaa
tatgccaaagaaaatggtatgaccttttttgaaacttcagcaaaaaccgcacagaatgtc
aatgagctcttctatgaaatagctaagagattggcaaaagctaatccttcacgtcaaacc
ggaatcaagctgcaaagcagacctcaagaaagaagaagaatgttttgttgtgcttaa

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