Lotus japonicus: 130716742
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Entry
130716742 CDS
T04348
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130716742
03036 Chromosome and associated proteins [BR:
lja03036
]
130716742
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130716742
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
Helicases
130716742
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130716742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
FlpD
Motif
Other DBs
NCBI-GeneID:
130716742
NCBI-ProteinID:
XP_057422735
LinkDB
All DBs
Position
5:complement(62585618..62591164)
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AA seq
638 aa
AA seq
DB search
MMTKADGEDENGFELVEPRGSREEKKKKKKKKVKMEESLLMEEEVIVKKEDPNAVSKFRI
SGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPT
KASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKR
GVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQ
TLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDI
IRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFRSGKFMTLVAT
NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSSISKIERE
SGVKFEHVSAPQPDDIAKAVGGEAAEMITQVSDSVIPAFKSAAKELLDNSDLSIVELLAK
ALAKAVGYTEIKKRSLLTSMENYVTLLLESGRPIFTPSFAYGILRRFLPEEKVEAVQGLT
LTADGNGVVFDVPAEDLKTYIDGQENAANVSLEVLKALPRLQQKDQSRGGRFGDGGGRGG
DRSWGNRFSGGRGGGGGRNDRFSNGGGRGHSNSNGKRW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaaagctgatggggaagacgagaatggttttgagctggttgagcctcgaggt
tcaagggaggagaagaagaagaagaagaagaaaaaggtgaaaatggaagagtctttgttg
atggaagaggaagtgattgtgaagaaggaggatcctaatgcggtttctaaattcaggata
tccgggccgttgagggaaatgttgaaggagaaggggattgtgtcgttgtttcccattcag
gctatgacttttgacaccgttcttgatggttctgatttggttggtcgggctcgcactggt
cagggtaaaactctggcctttgtgttgcccatattggagtctttaacaaatggtccaact
aaagcatcgagaaagactggctatgggaggcctccgagcgttattgtgcttttacctacc
agggaattggcttgtcaggtgcatgctgactttgaagtttatggtggggcaatgggattg
acttcttgttgtttatatggtggggctccatatcaaggtcaagaaatgaagctcaagaga
ggtgttgatgttgtgattggcacaccaggccgcataaaggatcatatagagagggggaat
attgacctgagccagctaaaattccgcgttcttgatgaagcagatgagatgttgaggatg
ggttttgttgaagatgttgagctgattctaggtaaggtaaaaaatgttggtcaagttcag
acacttctttttagtgctactttgccagactgggttaagcagattgctgcaaaatttttg
aagcgagataagaaaactgctgaccttgtaggaaatacaaaaatgaaggctagcacaagt
gttaggcatattgttcttccttgtactagttctgccaggtcccagcttatcccagacatt
attcgctgttatagcagtggaggccggacaattatatttactgagacaaaggagtctgct
tctcagctttcccagttgttgcctggagcaagagctctccatggtgacatacagcaggca
caacgtgaggttacattgtctggcttcaggtctgggaaattcatgacattagttgccaca
aatgtggctgctcgaggtctggatattaatgatgttcagttaataatccagtgtgaacct
cctcgggatgtagaagcctatatccatcgttctggtcgcacaggaagagcaggtaatact
ggagttgctgttatgctttatgatccaagaaggtcaagtatttctaaaatagaaagagaa
tcgggtgtaaaatttgaacatgtgtctgctcctcaacctgatgacattgcgaaagctgtt
ggtggggaagctgctgaaatgattacccaagtttcggatagtgtgattcctgcattcaag
tctgctgctaaggagcttttggacaactctgatttatcaatagttgaactacttgctaag
gctcttgccaaggctgttggttatacggagataaagaaaagatcacttctcacttccatg
gaaaactatgttacattacttcttgagagtgggagacctatcttcaccccatcttttgcg
tacggaatcttgaggagattcttgcctgaagagaaggttgaggctgtgcaaggtcttact
ctcactgcagatggaaatggtgttgtttttgatgtaccagctgaagatttaaagacatat
attgatggtcaggaaaatgcagcgaatgtaagtttagaggttttaaaagcattgccgcgt
ttacaacagaaagatcaatcaagagggggcagatttggagatggtggtggtcgtggtggt
gatagaagttgggggaacaggttttcaggtggaagaggtggtggtggcggcaggaatgac
agattttccaatggtggtgggagaggtcatagcaactcaaatggaaagagatggtga
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