Lotus japonicus: 130716822
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Entry
130716822 CDS
T04348
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lja
Lotus japonicus
Pathway
lja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130716822
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lja01002
]
130716822
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130716822
Enzymes [BR:
lja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130716822
Peptidases and inhibitors [BR:
lja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130716822
Ubiquitin system [BR:
lja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130716822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
130716822
NCBI-ProteinID:
XP_057422807
LinkDB
All DBs
Position
5:56560248..56581859
Genome browser
AA seq
1167 aa
AA seq
DB search
MSSPPPPPPLDQQQQQQQEEEEEQQPLDEEMEVPPSDVPEGPQPMDAQPETTNLFGAPIV
DESPSGRFTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATL
PYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVN
DTCIVEADVAVRKVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHM
PTTENDLPSGSIPLALQSLFYKLQYYDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLC
EKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSF
DKYVEVERLEGDNKYHAEQYGLQEAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDR
YEFPLELDLDRGNGKYLSPEADKSIRNLYVLHSVLVHSGGVHGGHYFAYIRPTLSNEWFK
FDDARVTKEDADRALEEQYGGEEELPHANPGFNNSPFKFTKYSNAYMLVYIRASDKDKII
CSVNEKDIAEHLKARLKKEQEEKELKKKEKAEAHLYTIIKVARDEDLFEQIGKDIFFDLV
DHNKVRSFRIQKQMPFLCFKEEVAREFGIPVQYQRFWVWAKRQNHTFRPNRPLTQLEEER
PVGHLREGITKANIADLKLFLEVKVGQDLQPIPPLERTKEDLLLFFKLYDPLNETLRYVG
SFYVKANEKPLDILTRLNQMADFAIDEEIDLFEVLSCNIIFYYCNIKGEQKFLHFVVHIQ
EIKFEPHVMCEPVDKGSTFRFNQLEDGDIICYQKPSKVVSGEQFRYPDIPSFLEYVHNRQ
VVRFRYLEKPKEDHFSLELSRINTYDYVVTRVAQHLGLNDPSKIRLTSHNCYSQLPKPQP
IKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKIAFHHAAKDEVAIYTTRL
PRQSIVEDVINDLKSKVHLSHPDADLRLLEVFYHKIYKIFSLGEKIENINDQYWTLRAEE
IPQEEKNLGPEDRLIHVYHFMKDTAHDQQIQNFGDPFFMVIHEGETLADVKLRIQKKLNV
PDEEFSKWKFAFISLGHPEYLQDSDIVSAQFQRRDIYGAWEQYLGLEHTDNAPKRSYIVN
QISEAYNDHFAILQNRHAFDKPVKIYN
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccgccgccgccgccgccgttagatcaacagcagcagcagcagcaggaggag
gaggaggagcagcagccgctggacgaggagatggaggttcctccctctgatgttcctgaa
ggtcctcagcctatggatgcccaaccagaaaccacaaatttgtttggtgctccgatagtg
gacgagtcaccatctgggcggttcacatggaccatcaggaatttttcaaggtctacaaaa
aaactatattctgaagatttctatgttgggggctacagatggcggatacttatatttcca
aaggggaacaatgttgatcagttgtcattgtatctagatgctactgattcagcaactttg
ccttatggatggagtagatatgcacagtttagcttgactgttgtcaatcaaattcgccat
aatttctcaatcagaaaagaaacacatcaccaattcaatgctcgtgagggtgattggggt
ttcacaagtttcatgcctcttgctgaattgtatgatcccggtagaggttatattgtgaat
gatacatgcatagttgaggctgatgttgctgtacgcaaggttattgattactggtcacat
gactctaaaaaggaaactggttatgtcggactaaaaaaccaaggggcgacatgttacatg
aattctctccttcagacattgtatcacattccttattttagaaaggctgtgtaccatatg
cctacaactgagaatgatttgccatcgggaagcattcctttggcattgcaaagtttattc
tacaagctgcagtattatgacagtagcgtagcaacgaaagagttaacaaaatcttttgga
tgggacacacaggattcattcctgcagcatgacgtccaagagcttaatagagttctttgt
gaaaagctagaagacaaaatgaagggaactgttgtggaaggcaccatacagaagttgttt
gaaggccaccatatgaactatattgaatgcatcaatgtggactataaatcaaccagaaaa
gaatcattttatgatcttcagcttgacgtcaaaggatgtcgggatgtgtatgattctttt
gacaagtatgttgaagtggaaagacttgagggtgataacaagtatcatgctgagcagtac
ggtttgcaggaggctaagaagggtgtcttgttcattgatttccctcctgttcttcagctt
cagttaaaacgatttgaatatgatttcatgcgagacactatggtaaagatcaatgatcgc
tatgagttcccgttagagctagatcttgataggggcaatggcaagtatctatctcctgaa
gcagataaaagcattcgcaacctttatgtacttcacagtgttttagttcacagcggtggg
gttcatggtggacactattttgcttatatcaggccaactctatcaaatgaatggtttaaa
tttgacgacgcacgagtgacgaaagaagatgcagatagggccttagaagagcagtatggt
ggtgaagaagagttacctcatgccaatcccgggttcaacaactctcccttcaaatttaca
aagtactcaaatgcatatatgcttgtttatatacgtgccagtgacaaggataagataatt
tgtagtgtgaatgagaaggacattgccgaacaccttaaagcaagattgaagaaagaacaa
gaagaaaaagagctgaagaagaaggagaaggcagaggctcacttatataccatcataaag
gttgcacgcgacgaagatctgtttgaacagattggaaaggatatattctttgatctagtg
gatcataacaaagtgcgaagttttcgtatccaaaaacaaatgccattcttgtgttttaag
gaagaagttgctagagagttcggtatacctgtccaatatcaacgtttttgggtgtgggca
aagcgccaaaaccacactttccggccaaatagacctctgacacagctggaagaagaacga
ccagtgggacatttacgggaaggtataactaaggcaaatattgcagatctgaagttattt
ttggaagtgaaagtagggcaggatctacagcctattccccctctcgagaggacaaaagaa
gatttgttactgttctttaagctttatgaccctttgaatgaaacactgcggtacgttggg
agcttttatgtgaaagctaatgagaagcctttggatatattgacaagattaaatcaaatg
gctgactttgctattgatgaagaaattgacctatttgaggttttgtcatgcaacattatt
ttctattattgtaacataaagggagagcaaaaattcttacattttgttgtgcatattcag
gaaatcaaatttgaaccccatgtcatgtgcgaacctgttgacaaggggtccacattccga
ttcaatcagcttgaggatggtgatattatttgctaccagaagccatccaaagttgtaagt
ggtgagcaatttcggtatcctgatattccttccttcttggaatatgtgcataaccgtcag
gttgtacgcttcaggtacttggagaaaccaaaagaggaccatttcagtctcgagttgtca
aggatcaacacatatgattatgttgttacaagagttgctcaacatcttggtttgaatgat
ccttctaaaatcagactcacatctcataactgttactcccagctacctaaaccccagcct
atcaagtaccgaggagttgaacatttatctgacatgctggttcactacaatcagacttct
gatatactatactatgaagtactggatatccctctcccagaattgcaatgcctaaaaaca
cttaaaattgctttccatcatgctgccaaggatgaagtggcgatttatactactagatta
ccgagacagagtattgtggaagatgtaatcaatgatcttaaatcgaaggtgcatttatct
catcctgatgcagatctaagattgcttgaggttttctatcacaagatctataagattttc
tctctcggtgaaaagattgaaaatattaatgatcaatattggacgttaagagcagaggag
attcctcaagaggagaaaaatcttggccctgaagatcgattgattcatgtttatcatttc
atgaaagacactgcacacgatcagcaaattcagaatttcggagatccttttttcatggtt
atccatgagggtgagacattggctgatgtcaaattgcgaatacagaaaaagttgaacgtt
ccagatgaagagttttcaaagtggaagtttgcatttatttctcttggtcatcctgagtac
ctacaagattcagatattgtttccgcccaatttcagagaagagatatatatggtgcttgg
gagcaatatcttggactggaacacactgacaatgctccaaaaaggtcctacatagtcaac
cagatttcagaagcctacaatgaccattttgcaattttgcagaaccggcatgcatttgat
aagccagtaaaaatctacaactag
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