Lotus japonicus: 130716847
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Entry
130716847 CDS
T04348
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130716847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130716847
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130716847
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
WPP
LRR_6
LRR_CARMIL
LRR_TMOD-LMOD
LRR_NLRC4
LRR_MHP1-HER1-GIP3
IL6
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
130716847
NCBI-ProteinID:
XP_057422846
LinkDB
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Position
5:complement(42606269..42609104)
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AA seq
533 aa
AA seq
DB search
MDSAAQSYQHRSLSIKLWPPSQSTRLMLVERMTKNLTTPSIFSRKYGLLSKEEAEEDAKE
IEDVAFANAAQHFEKEPDGDGSSAVQIYAKESSKLMLEVLKRGPKVKDDGELVSEKAGST
AETVFDISGGRRAFIDGEEAAELLKPLRGPNSYTKICFSNRSFGLDAAHVAEPILISIKD
QLKEVDLSDFIAGRPEAEALEVMTIFSSALEGCALRYLNLSNNAMGEKGVRAFRSLLKSQ
YNLEELYLMNDGISEEASKAVAELIPSTEKLRVLHFHNNMTGDEGAVAIAEIVKRSPALE
DFRCSSTRVGSDGGVALAEALGACKHLKKLDLRDNMFGVEAGVALSKVIPAFVDLTEIYL
SYLNLEDDGAEALANALKESAPSLEILDMAGNDITAKAAASVAACISSKQFLTKLNLSEN
ELKDEGAVLISKALEEGHGQLNEVDLNTNSITWSGARLLAEAVVQKPGFKLLNINTNFIS
EEGVDELKNIFKNSPDTLGPLDENDPEGEDNDYEAEEDDEHDELESKLKGLGI
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcagcgcagtcgtaccagcatcgctcactttcaatcaagttatggcctcct
agccagagtacaaggctaatgcttgtggagcggatgaccaagaacctaactactccgtcc
attttctctagaaagtatgggctgctgagcaaagaagaggctgaggaggatgcgaaggaa
attgaggatgtagcttttgctaatgctgcccaacactttgagaaggagcctgatggtgat
gggagttctgctgtacagatttatgccaaggagtctagtaagcttatgttggaggtgttg
aaaagaggaccaaaagtgaaggatgatggagaattggtatctgagaaggctggttctact
gctgaaactgtttttgacatatctgggggtcgcagagcttttattgatggggaggaagct
gctgaacttttgaaaccattgagggggccaaactcttatactaagatatgtttcagcaat
aggagttttggcttggatgctgctcatgtagctgagcccatccttatatcaattaaggat
caattgaaagaggtagatctatcagattttattgctggaaggccagaagcagaagcactt
gaagtgatgactatattttcttctgcgctggaaggttgtgctttaagatatctgaatctg
tcaaataatgccatgggtgaaaagggggtaagagcatttcggtcgctcctgaaatcgcaa
tataacttggaggagctttatttgatgaatgatggtatttcagaggaagcttcaaaagca
gttgctgaattgatcccttccactgagaagcttagggttcttcatttccataataatatg
actggggatgaaggggcggttgctattgctgaaattgtgaaacgttccccagctttggaa
gatttccgctgttcatctaccagagtaggctctgatggtggagttgctcttgctgaagca
cttggggcttgtaagcatttgaagaagcttgatttgcgtgacaatatgtttggtgtggaa
gctggagttgctctaagcaaagtaatacctgcatttgttgatctgactgagatatacctc
agttatttgaacttggaggatgacggcgcagaagcccttgccaatgcactcaaggaatct
gcaccgtcactggaaattttggatatggctgggaatgacataactgcaaaagctgctgca
tctgtggctgcctgcatatcatcaaagcagttcctaaccaagttaaatttatctgaaaat
gaactgaaggatgaaggtgcagttttgatcagtaaggcactggaagaaggtcacggccaa
ttaaatgaagttgatttaaacacaaactcaatcacatggtcaggagctaggctgttggca
gaagctgttgttcaaaaacctggatttaagttgctaaacattaatactaacttcatttct
gaagaaggtgtcgatgagttgaagaatatatttaaaaattcgcctgatacgctgggtcct
ttggatgagaatgatcctgaaggagaggacaatgactatgaggctgaagaagatgatgag
catgatgagttggaatcaaaactgaagggccttggcatttag
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