KEGG   Lotus japonicus: 130716884
Entry
130716884         CDS       T04348                                 
Name
(RefSeq) uncharacterized protein LOC130716884
  KO
K15361  WD repeat-containing protein 48
Organism
lja  Lotus japonicus
Pathway
lja03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    130716884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lja03400]
    130716884
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     130716884
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF4 WD40_MABP1-WDR62_1st RAWUL ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 130716884
NCBI-ProteinID: XP_057422900
LinkDB
Position
5:52271044..52285259
AA seq 763 aa
MHRVGSAGNTNSSTHPRKEKRLTYVLNDSDDTKHCAGINCLAVLKSAVSDGSDYLFTGSR
DGRLKRWALGEDAATCSATFEAHVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFSTGTCTR
TLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGING
SGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEK
VVRVWDPRSGSKTMKLKGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHSYAV
HTDSVWALACTSTFSHVYSGGRDFSLYLTDLQTRESVLLCTGEHPICQLALHDDSIWVAS
TDSSVHRLPAEGRNPQKIFQRGNSFLAGNLSYSRARLSLEGSTPVPAYKQPTLTIPGIPA
IVQHEVLNNRRHVLTKDTSGSVKLWEITKGVVVEDFGKVSFEEKKEELFEMVSIPTWFTV
DTRLGSLSVHLDTPQCFSAEMYSVDLSIVGKPEDDKINLARETLKGLLAHWLVKRKQRMG
NPSPANGELLPGNDNGTRSFTHSRIEVDGNSENDAMVYPPFEFSIVSPPSIVTEGTHGGP
WRKKITDLDGTEDDKDFPWWCLDCLLNNRLPPRENTKCSFYLHACEGTLQIHTQGKLSAP
RVLRITKVINYIVEKLVLDKSSDIVNADVNFPPGIGGSQSQLHAIGDGSFRSGLKPWQKI
RPSIEILCNNQVLSPEMSLATVRAYIWKKTDDLILNYRSIQGR
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcaccgcgtgggtagtgcagggaacacaaacagttcaactcacccgcgtaaggagaag
agattaacatatgtgttgaatgattctgatgacacaaagcattgcgcaggcataaattgt
ttggccgtacttaagtctgcagtatctgatgggtctgattatctcttcactgggagccgt
gatggcaggctaaaacggtgggcactaggtgaggatgcagcaacatgctctgctaccttt
gaagctcatgtggactgggttaatgatgccgttcttgtgggtgatagtacccttgtttct
tgttcgtcagatacaacccttaagacatgggatgccttttccactggaacatgtactagg
acgctccgccaacactcagattatgttacttgccttgcagcatctgaaaaaaatagcaat
attgttgcctctggtggcctcggtggagaggttttcgtatgggatcttgaagctgcacat
gcttcagctgcaaagtgcattgatgctacggatgatgatacttcaaatggtatcaatggt
tctgggaactcattaccattgactagcttacgtagcatcagctcaagtaacagtatatct
gtgcacactactcaaaatcaaggatacattccaattgctgctaaaggccataaggaatct
gtttatgcattggcaatgaatgaaggtggaacacttcttgtctctggtggtacagaaaag
gttgtgcgtgtttgggatccaagatctggatcaaagactatgaaactaaaagggcataca
gataacatcagggctttgcttctggattctactggcaggttttgtttatcaggatcttca
gactccatgataaggctttgggatcttggtcagcaacgttgcttgcattcatatgccgtt
cacacagattctgtgtgggctcttgcttgcacttcaacatttagtcatgtttatagtggt
ggtagagacttctcgttatacttgacagacttgcagacaagagagagcgttttgctttgc
actggcgaacaccctatttgtcaattggctttgcatgatgatagcatatgggttgcatca
acagattcttcagttcatagattgcctgctgaaggacgaaatcctcaaaagattttccaa
agaggcaattcttttttagctggaaatttgtcatattcaagagcaagactgtcactagaa
ggatctacccctgttcctgcatataaacaaccaactttaactattcctggcatccctgca
atagttcagcatgaagttttaaataataggaggcatgtcctgacaaaggatacttctggt
tcagtcaagttgtgggaaattacaaaaggtgttgtagttgaagattttggaaaggtttct
ttcgaggagaaaaaggaagagctttttgagatggttagcattcctacatggttcacagtt
gatactaggcttggaagtttgtctgtacatttggacactccccagtgcttttctgcagag
atgtattcagtagatcttagtattgtgggcaaaccggaagatgataagattaacttggct
cgagaaaccctcaaagggctcttggctcattggttggtaaaacgaaagcaaagaatggga
aatcctagtccggctaatggggaattattacctggaaatgataatggtactagaagtttt
acacattcaagaatcgaggttgatggaaattctgagaatgatgctatggtttatcctcca
ttcgagttctcaatcgtttcccctccttcaattgttactgagggaactcatggaggtccc
tggaggaaaaaaattactgatcttgatggaactgaagatgataaagactttccctggtgg
tgtctggactgcttattgaataatcgattacctcctagagaaaataccaaatgcagtttc
tatttacatgcttgtgaaggcactctccaaatccacactcaagggaagctaagtgctcca
cgcgtattaagaattactaaagttattaattatattgtcgaaaagctagttcttgacaaa
tcttcggatattgtcaatgctgatgttaatttcccccctggaattggtgggtcacagtca
cagctccatgcaattggggatggatctttccgatctgggttgaaaccttggcaaaagatt
agaccttctattgagatattgtgcaacaaccaggtattgtctcctgaaatgagcttagct
acagtgcgagcttatatatggaagaagacagatgacctgatcctaaattacagatcaatt
caagggaggtga

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