Lotus japonicus: 130716911
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Entry
130716911 CDS
T04348
Name
(RefSeq) chaperone protein ClpC, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lja03110
]
130716911
Chaperones and folding catalysts [BR:
lja03110
]
Heat shock proteins
HSP100
130716911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
TniB
UVR
AAA_14
AAA_18
NACHT
AAA_28
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
MazE_antitoxin
AAA_23
Motif
Other DBs
NCBI-GeneID:
130716911
NCBI-ProteinID:
XP_057422936
LinkDB
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Position
1:79247590..79254834
Genome browser
AA seq
922 aa
AA seq
DB search
MARVLAQSINVPDLVARQRHGNHKGSGKSKRSAKMMCALQTSGFRLAGFSGLRTYNPLDT
MLRPGLDFHSKVSIATSSRRGKATRGVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVT
ATVGSGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRLIIKEKEESVRNQDFEKAGELRDKEMD
LKAQISALVEKGKEMSKAETEAGDAGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM
EDTLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLREVFQRLKNKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD
GNVIVLNGSSGTPESLPEALPV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctagggttttggctcagtcaattaatgtccctgacctagtggctaggcaaaggcat
ggtaaccataagggatcaggaaaatcaaaaagatcagccaaaatgatgtgcgccttacaa
acaagtggatttagattggcaggtttctcaggacttcgtacttacaatcctttggatact
atgctgagacctggacttgattttcactctaaagtatcaattgcaacttcttcacggcgg
ggaaaggctaccagaggtgtacccaaagccatgtttgaacgtttcacggagaaagcaatc
aaagtaattatgcttgcccaggaggaagcaagacgtctcggtcacaatttcgttggaaca
gagcagattctattgggtcttataggtgaaggcactggtattgccgccaaggttctaaag
tctatgggaatcaaccttaaagatgcacgtgttgaagtggagaagattattggaaggggt
agtggatttgttgctgttgagattccatttactccccgtgcaaagcgtgtcttggaactt
tcactggaggaagctcgccaacttggacacaattatatcggatctgagcacttgcttctg
ggccttcttcgtgaaggtgaaggtgtagcagcacgtgttcttgaaaacctgggtgctgat
cctactaatattcgcacacaggttattcgcatggtgggtgagagtgctgatagtgtaact
gcaactgttggatcaggaagtagtagcaataagatgccaactttggaggagtatggtacc
aatttaaccaaactggcagaagagggaaagttggatcctgttgtgggaaggcagccgcaa
attgaacgtgtcactcaaattttaggccgtcgcaccaaaaacaatccttgtcttattgga
gaacctggtgttgggaagacagcaattgctgaaggtcttgctcagaggattgcgaatggt
gatgtacctgaaaccatagaggggaaaaaggttattaccctcgacatgggtcttcttgta
gctggaactaaataccgtggtgagtttgaggagaggttgaagaaattgatggaagaaatc
aaacaaagtgatgagataatactttttatcgatgaagtgcacactctaattggagcagga
gcagctgaaggggcaattgatgctgctaacattctaaaaccagctctcgctagaggtgaa
ctacagtgtattggagccacaacattggatgaatacaggaagcacattgaaaaagatcct
gctttggagagacgattccagccagttaaagtaccagagccaactgtagatgaaaccata
caaatactgaaaggacttagagaacgttatgaaattcaccacaagctccgctatactgat
gagtctcttgtagctgctgcacagctgtcataccagtatattagtgatcgatttttgcct
gacaaagctatagatttgattgatgaagctggttcaagagttaggcttcaacatgcacag
ttacctgaagaagctagagaacttgacaaggaggtgaggctgattattaaggagaaagaa
gaatctgttcgcaaccaagactttgaaaaggctggagagctacgagacaaagaaatggat
cttaaggcacagatctcagcacttgtggagaaaggcaaggagatgagcaaggcagagact
gaggcaggagatgcaggtcctgttgtgactgaagttgatatccaacacattgtgtctgcc
tggactggtattcctgttgaaaaagtgtcaacagatgaatctgatcgcctcctcaagatg
gaagacactttacacaagcgaatcattggccaagatgaagcagtgaaagccattagtcgg
gctatccgtcgagctcgggttggtttgaagaaccctaaccgtccaattgccagcttcatc
ttttctggtccaactggtgtggggaagtctgaattggccaaagcattggctgcatactac
tttggctctgaagaggccatgattcggcttgacatgagtgaattcatggaaaggcacact
gtctccaaacttattggttcacctccaggatatgttggttacactgaaggcggtcaattg
actgaggctgttcggcgtcgtccttacactgttgtgctattcgatgagattgagaaagcc
catcccgatgtgttcaacatgatgcttcagatcctggaagatggaagactaacagacagc
aagggtagaactgtggatttcaagaacacacttcttataatgacttcaaatgtcggaagc
agtgtgatcgagaaaggaggccgccgaattgggtttgatcttgattatgatgagaaggat
agcagttacaacagaatcaagagcttggtgaccgaggagctaaaacaatacttcaggcca
gaatttttgaacaggttggatgaaatgattgttttcaggcaactcacaaagctggaggtc
aaggagatagcagacataatgctcagggaggtgtttcagagactcaagaacaaagagatt
gaacttcaagtgacagaaaggttcagggacagggtggttgacgaaggttacaatcctagt
tacggagctaggcctctaagaagagcgataatgcgactcttggaggacagcatggctgag
aagatgcttgctagagagatcaaagagggcgactctgtcatagtggacgttgattctgac
ggtaatgtgatcgtgctcaatggtagcagtggcaccccggagtcgttaccagaggctctt
cctgtataa
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