Lotus japonicus: 130716939
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Entry
130716939 CDS
T04348
Name
(RefSeq) protein NPGR2
KO
K21843
tetratricopeptide repeat protein 7
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130716939
Membrane trafficking [BR:
lja04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
130716939
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_14
TPR_8
TPR_1
TPR_17
TPR_7
TPR_12
TPR_11
TPR_CcmH_CycH
TPR_Slam
ARM_TT21_C
ARM_TT21
Vps39_1
Trans_coact
ARM_TT21_4th
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
130716939
NCBI-ProteinID:
XP_057422980
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All DBs
Position
5:complement(40106886..40112772)
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AA seq
713 aa
AA seq
DB search
MKWLRAGGETLGGADEVFPSSESIVTKDFSISGPSGLAGQVDKKPDTGNIEEAESSLRES
GVLNYEEARALLGRYEYQKGNLVAALHVFEGIDISAVTPKIKLALSRNREHQKRRSQNHD
EPQMSIHAVGLLLEAVFLKAKSLHVLGRFKEAAVSCKVILDIVESSLPEGLPDNFGAECK
LQETLSKAVELLPELWKLADCPREATLSYRRALLHHWNLDAETIAKIQKEFVVFLLYSGG
EAAPPDLRSQMDGSFVPLNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSVSGDL
TSLANQLEELLPGTIDKRERYHALALCYYGAGKDLVALDLLRKLSSNRKEPKHVPGLLLA
SKICSENPSLAEEGVRFAQGVLESLDGRCNQLKNLVEFFQGVSLSATSKLPVSDSERLKR
QSEALHALENAARTSKMRDPLVLYHLSLEYADQRKLDSALHYAKCLLKLEGGANVKGWLL
LARILSAEKRFVDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRSAIETYTQLLAV
LQIQSKSSGSWKKLSKDTRDRSRNLELEIWHDLAHVYISLSQWHDAEVCLSKSKAIKPYS
ASRCHASGMMYEAKGLYKEALTAFREALDIDPDHVPSLISTALVLKRCTNPSNPAVRSFL
MDALRHDRLNASAWYNLGLLHKAEGTASSVVEAAECFQAAYSLEESAPVEPFR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctacgcgcaggaggggaaacattgggaggagcagatgaagttttcccttca
tctgaatctattgtaaccaaggatttttccatcagtgggccatcgggccttgccggacaa
gttgataagaagccggatacggggaatatagaagaagctgaatcatctttacgtgagagt
ggcgtcttgaactatgaggaagctagagctctgctgggaagatatgaatatcagaaagga
aatttagtagccgccttgcatgtctttgagggaatagatataagtgccgtgactcctaag
atcaaacttgccctttctagaaacagagaacaccagaagagacgttcccagaatcacgat
gagccgcaaatgtctatacatgctgttggcttgctgttggaagcagtcttcctaaaagca
aaatctctgcatgttcttggaaggtttaaagaagctgccgtatcttgcaaagttattctg
gacatagtggagtcttcattgcccgaaggcttgcctgataattttggtgctgaatgtaaa
ttgcaggagaccttgagcaaggcagttgagctgcttcccgagttatggaaacttgctgat
tgtccgcgcgaagcaactttatcttaccggcgagcgctccttcatcattggaatcttgat
gcagagactatagcgaagattcagaaagaattcgttgtttttcttctatacagcggaggg
gaagcagcaccccctgatctccgttcccaaatggacggctcatttgtgccgctaaacaac
atagaagaggctattcttcttttaatgattttgctaagaaaagtctctctcaatagaatt
gagtgggatccttcaattttggaccacctttcattcgctctttctgtttcaggggatttg
acatctttagctaatcaattggaagaattgctccctgggactatcgataaaagagaaagg
taccatgctcttgctctctgttattatggagcaggtaaggacttggtagcactggatctt
ctcagaaaattatcgagtaatagaaaggaaccaaaacatgttccaggtttgttattggct
tctaagatttgttctgagaatcccagtctagccgaagaaggagtaagatttgctcaagga
gttcttgagagtttagatggcaggtgtaatcagttaaaaaatctcgttgaattttttcaa
ggtgtttcattgtcagcaacctcgaaattgcctgtttctgattctgagaggcttaagaga
caatctgaggcgcttcatgccttggaaaatgctgccagaacgagtaaaatgagagatccc
cttgtgctatatcatctcagtttagaatatgcagatcaaaggaagttggactcggcactt
cattatgcaaagtgccttttaaaactggaaggtggtgctaatgttaaagggtggttattg
ttagctcggatattatccgctgaaaaacggtttgtggatgctgaatctattatcaatgct
gcgttggatcagactgggaaatgggatcagggtgatttgttgcgaacaaaagctaaactt
caaattgcacagggccagttaaggagtgccattgagacatatacccagcttcttgctgtc
cttcaaatccagagtaaaagttctggttcctggaagaagttatctaaggacactagagat
cgttctaggaacttggaattggaaatatggcatgatcttgctcatgtgtacatcagtctt
tcacagtggcatgatgcagaggtgtgtctttcaaaatccaaggccatcaaaccatactca
gcttctcgatgtcatgcatcaggtatgatgtatgaagcaaagggtctttacaaggaagct
ctgacagcttttcgcgaagctttggacattgatcccgatcatgtccccagcttaatctcc
actgctctagttctcaaacgatgcactaatccatcaaatccagcggtcaggagctttctg
atggacgcgctacggcacgacaggttgaatgcttctgcttggtataatcttggccttctt
cacaaggctgagggaacagcatcatcagtggttgaagctgcagagtgttttcaggcagca
tactctctcgaagaatcggcaccggttgaacctttcagatga
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