Lotus japonicus: 130716957
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Entry
130716957 CDS
T04348
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130716957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130716957
03036 Chromosome and associated proteins [BR:
lja03036
]
130716957
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130716957
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130716957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130716957
NCBI-ProteinID:
XP_057423006
LinkDB
All DBs
Position
5:complement(50086972..50093737)
Genome browser
AA seq
1021 aa
AA seq
DB search
MFGSTNPFGQQSSSPFGSSQSVFGQNNSSSNPFAPKPFGSNTTPFGAQTGTSMFGGTSTG
VFGAAQQSSPFSSTTAFGASSSPAFGSSAPAFGSTSTPTFGNSSSSSFGGSSVFGQKPAF
GGFGSTPTQTSPFGGAAQPSQPAFGSSIFGSSTPFGASSQPAFGSTGTPAFGATSAPAFG
AMNTPAFGATSTPAFGATSTPAFGSTSSPTFGNTGSAFGVSSAPAFGGGGAFGASSSPMF
GSTSTPAFGASSTPAFGASSTPAFGASSTPAFGASSTPAFSFSSNQAFGQSSSAFGSSSP
FGSTTSPFGGQSSAFGSQTPTPAFGSTGFGQSGFGGQRGGSRVASYSATTEADSGTSGQT
AKLESISAMPVYKDKSHEELRWEDYQLGDKGGPQPSAQPTGLGNFSSSTTQTNAFSPSPS
FGQSSANPFSSTTPNSNPFAQKTSTFTTSAFGGTSSAPSFSSSAFGSSTSAAAPSIFGAA
TPSFGANSSPSPTFGQSPSLFNTAPAQPTSSPFGSSIFGNTQPSQLFSSAAPTQPTNAFG
QNTASPFGQTASFGQSSLFNSPSSGLGGSIFSTSGPLTSTGFGQTAQPISTPFQPTQAAQ
TTGTFPFSNFGQTQPVAGGSGFGGTPGMFGQNNFGLQSSTQSTMVAQAAPVTNPFGTLPA
LPQMSIGRAGTTPSIQYGISSMPAQDKPATVRISSLLTSRHLSQRRVKFPLRKYKNDGPK
VPFFSDDEDTPTTPKADALFIPRENPRALIICPVEQWPGRASEKTSFKDRNISVNENGMI
SKEAGSTPPDRTNSENKEKTAAENGFVKVPVQPTTTKQASNGSNEDHSPADMYKTLSGHR
AGEAAIVYEHGADVEALMPKLWRSDYYTLPRINELAAKERAEPGFCSHVKDFVVGRHGYG
SIKFLGETDVRGLDLESIIQFNNREVIVYMDDAKKPPVGQGLNKPAEVTLLNIKCFDKKT
GQQYTEGPKIEKYKEMLKRKADDQGAQFVSYDASKGEWKIRVTHFSVYKLVEEDSWMEDD
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttcaacaaacccttttgggcagcagtcgtcgagcccgtttggctcctcccag
tcggttttcgggcagaacaattcaagtagcaatccttttgccccgaagccgtttggtagt
aatactactccatttggtgcacaaacaggtacttccatgtttggaggtacttccactggt
gtatttggtgcagctcaacaatcttctcccttctcttccactacggctttcggggcttca
tcttcaccagctttcggtagttcagcgcctgcttttgggtcaacttcaactccgacattc
ggtaattcatcatcatcatcgtttggaggatcatccgtattcggtcagaagcctgctttt
ggaggttttggctctactcctactcaaacaagtccatttggaggtgccgctcaaccatca
caaccagcatttggaagcagcatatttggttcgtcaacaccttttggcgcatcatctcag
ccagcatttggttcaactggcacacctgcatttggtgctacgagcgccccagcatttggt
gctatgaatactccagcatttggtgcaacgagcacccccgcttttggtgcaactagcacc
cctgcatttggttcaacctcaagcccaacctttggtaacacagggagtgcatttggcgtg
tcaagtgctcctgcgtttggaggtgggggagcatttggtgcttcaagtagccctatgttt
ggttcaacaagtacgcctgcatttggggcctctagtactcctgcttttggtgcttctagt
acccctgcttttggtgcttctagtacccctgcttttggggcttctagtacccctgctttt
agttttagctccaaccaagcttttggtcaatctagttctgcctttggcagtagcagtcca
tttggtagtacaacctcaccctttggaggccagagttctgcatttggatcccagactcca
actccggcttttggaagtactggttttgggcagtctggatttggaggtcaacggggagga
agtagagtagctagttactcagcaaccactgaagcagatagtggtacctctggacaaacc
gcaaaattggagtccatatctgccatgcctgtttacaaagataaaagccacgaggagcta
agatgggaggactatcagttgggagataaaggtggaccacagccctctgctcagccaact
ggtttgggaaactttagttcgtctacaacacaaacaaacgccttttctccttcaccatca
tttggtcaatcatcagccaatcctttctctagcacaacacctaattctaatccatttgca
cagaagacttcaacttttactacttctgcatttggtggaacttcatctgctccttccttc
agttcatcagcttttggttcttccacatcagcagcagcaccttcaatttttggcgcagct
acaccttcatttggagctaactcttcaccatcaccgacctttggtcaatctccatccctg
tttaatactgctcctgctcagcctacatcttcaccatttggctcaagcatttttggcaat
acccagccatcccaattatttagctctgcagcccctacgcagccaactaatgcttttgga
cagaataccgcctccccctttgggcagactgcatcttttggtcaatcaagcttgtttaat
tctccatcgtcagggcttggtggaagcattttctcaaccagcgggccactcacttctaca
ggttttggtcaaacagcgcaacctatttcaacacctttccaacctacacaagctgctcag
acgactggtacttttccctttagcaactttggccagacacaacctgtagctggtggaagt
ggcttcggtggcactccaggaatgtttggtcagaataattttggacttcagtcttctacc
cagagcaccatggttgcacaagcagcacctgttacaaatccatttggaacacttcctgct
ttgcctcagatgtcaattggtcgagctggaactactccttcaattcaatatggaatctct
agcatgcctgcccaggacaaacctgctactgttagaatatcatctttattgacttctcga
cacctttcacaaagacgagtcaagtttccgctcagaaaatataagaatgatggaccaaag
gttccattcttcagtgatgatgaggatactccaaccacacccaaggctgatgctcttttt
attcctagggaaaatccaagggctttgatcatttgtcctgtggagcagtggcctggcagg
gcttctgagaagacatctttcaaggatagaaacatctcagtgaatgaaaatggaatgatc
tctaaagaagcaggttccacacctcccgacaggacaaactctgagaataaagagaagact
gcagctgaaaatggttttgtcaaggtgccagttcagcccacaactacaaagcaggcatcc
aatgggagcaatgaagaccattctccagcagatatgtacaagacactcagcgggcacaga
gctggtgaggctgccattgtttatgaacacggagctgatgttgaggccctaatgccaaag
ctgtggcgatctgattactacacactacctcggataaacgaactggcggccaaggaaaga
gctgagccaggattttgcagtcatgtcaaggactttgtggtaggaaggcatggctatggc
agcatcaaatttctgggcgagacagatgtacgagggcttgatcttgagtccattatacag
ttcaacaaccgcgaggtgattgtgtacatggatgatgcaaagaaacctcctgttggacaa
ggactgaataagcctgctgaggtaaccctcctcaacataaaatgtttcgacaaaaaaact
ggacaacagtatactgaagggccaaagatcgagaaatacaaggagatgctgaagagaaag
gctgatgaccaaggtgctcaatttgtgtcatatgatgcctccaaaggagagtggaagatc
agagtcacccacttcagtgtttacaagctggtagaagaagacagttggatggaagatgac
gcatga
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