Lotus japonicus: 130717032
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Entry
130717032 CDS
T04348
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130717032
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
130717032
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_1st
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
130717032
NCBI-ProteinID:
XP_057423101
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Position
5:complement(65299637..65304730)
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AA seq
833 aa
AA seq
DB search
MHSEVVEVKRVFIGAGCNRIVNNVSWGASGLVSFGAHNAVAIFSPKSAQILTTLPGHKAV
VNCTHWLPTSKFLFKAKGLEQHYLLSGDADGAIILWELSLIDGKWRQVSQLPQSHKKGVT
CINGLMVSQTEAMFASTSSDGTVCVWELVFPLTSRGDCKLSCLDSFSVGSKSMVALSLAE
LPGGGGQIVLAMGGLDNKIHLYCGGRTGKLVHACELKGHTDWIRSLDFSLPISINGEVNN
IFLVSSSQDKAIRIWKMALVSSVSNGHGIYKKEEMSLSSYIKGPVLVAGSSSFQISLESL
LIGHEDWVYSVQWQPPVEMEGNAYYQPQSILSASMDKTMMIWQPEKTSGVWMNVVTVGEL
SHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGYDNWLTQKVPSGHFASVTDIGWARS
GDYIMSVSHDQTTRIFAPWKVEASLQDGEFWYEISRPQVHGHDINCLAVVHSKGNHRFVG
GADEKVARVFEAPLSFLKTLNNATLQKSSSDDVLNGVQILGANMSALGLSQKPIYAQAVN
EASERNGTDGIDTLETIPEAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDH
RGELVASSCKAQSAAVAEVWLWQVGSWKTVGRLQSHSLTVTQMEFSHDDRFLLTVSRDRQ
FSVFTITRTGSGEVSYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWGVEKESS
VKQLLTLPQFTSSVTALSWAGLHDQKNAGILAVGMENGQIELWSLSYNRADDGSITTPGL
AAALLVRVDPFICHASTVNRLAWKKSEEDHLSMQLASCGADNCVRVFDINVVE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtgaagttgttgaagtgaaacgcgtgttcatcggagcaggatgcaacagaata
gtcaacaacgtttcctggggtgcttctggtttagtctcttttggagctcacaacgccgtc
gccatcttctcccccaagagtgctcaaattttgactactcttcctggtcacaaagcagtt
gtgaattgcactcactggctccctaccagcaagtttctattcaaggctaaaggattggag
cagcactatttgttatctggagatgcagatggtgctattattctgtgggaactgtctctt
attgatgggaagtggagacaagtatcacaactgccacaatcacacaagaaaggtgttaca
tgcattaatggacttatggtttctcaaactgaggcaatgtttgcatctacttcttcagat
ggcactgtttgtgtttgggagctggtatttccgctgactagcagaggtgactgtaaactt
tcatgcctggattctttctctgttggttctaaatctatggtagcgctatcattggcggaa
ttgcctggaggtggtgggcaaatcgtccttgcaatgggaggattggataacaagattcac
ctttattgtggtggaaggacaggaaagcttgtgcatgcatgtgagctaaaagggcataca
gattggatccggagtttggacttctcattacctatcagcatcaatggggaagtaaacaat
atttttctggtgagttcatcacaagataaagccataagaatttggaagatggcattagtt
agttccgtatccaatggacatggcatatacaagaaggaagaaatgagcttatcatcctat
ataaagggtcctgtacttgtggctggttcatcctcttttcagatatccttagaatctctt
ttaattggacatgaggactgggtatattcggtgcagtggcaacccccggtggaaatggaa
gggaatgcctattatcaaccacaaagcattctatctgcatctatggacaagactatgatg
atctggcaacccgaaaagacttctggtgtctggatgaatgtagtcactgttggggaacta
agccattgtgctttgggtttctatggtggtcattggagcccaaatggagattcaatttta
gcacacggatatggtggatctttccatctttggaaaaatgttggttatgataactggctg
acgcaaaaggttccttctggtcattttgcatctgtgactgatattggatgggctagatct
ggtgattacattatgtcagtcagtcatgaccagacaactagaatttttgctccgtggaaa
gttgaggcttctctccaagatggagaattttggtatgagatatctcgccctcaggttcac
ggtcatgatataaactgtctggcagttgttcatagtaagggaaatcatcgttttgttggt
ggagctgatgagaaagttgccagagtgtttgaagccccattatcatttttgaaaacatta
aataatgccactttgcagaagtcttcttctgatgatgttttgaacggcgttcagattttg
ggtgcaaatatgtcagctcttggactatcacagaaacctatttatgctcaagctgtgaac
gaggcatctgaaagaaatgggactgatggtattgacactcttgaaactattccggaagca
gttccaactgtgttcactgaacctccaattgaagatcaactggcctggcatacactctgg
cctgaatcacacaaactctatggtcatggaaatgaactattttctctatgctgtgatcat
aggggtgagcttgttgcttcttcatgtaaggcccaatctgcggctgtggcagaggtatgg
ctctggcaggttggttcatggaaaacagttggccgcttgcaatcccacagcttaacggtg
actcaaatggagttctcacatgatgacagatttctcttgactgtctctagagatcgccag
ttctccgtttttacaatcacaagaacaggttctggtgaagttagttatagtctactcgcg
aggcaggaggggcacaagcggattatctggtcatgttcttggaacccacatggtcatgaa
ttcgcaacaggatcacgggataagacagtgaaaatctggggtgtagagaaggaatcatca
gttaaacagcttctgactttacctcaatttacgagtagtgtgacagcattatcttgggct
ggtctccatgatcagaaaaacgctggaattctagctgtgggaatggaaaatggccaaata
gaactgtggagcctgtcttataatagagcagatgatggcagcattacaactccaggtttg
gctgctgctcttcttgtacgtgtagatccttttatatgccatgcctctactgtgaaccgg
ttggcatggaagaaaagtgaggaagatcacttgagcatgcaacttgcttcttgtggtgct
gataattgtgtaagagtgtttgatataaatgttgttgagtaa
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integrated database retrieval system