Lotus japonicus: 130717242
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Entry
130717242 CDS
T04348
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130717242
Enzymes [BR:
lja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
130717242
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130717242
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GFIT
Motif
Pfam:
PseudoU_synth_2
MtrB_PioB
Motif
Other DBs
NCBI-GeneID:
130717242
NCBI-ProteinID:
XP_057423384
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All DBs
Position
1:complement(79515818..79525765)
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AA seq
381 aa
AA seq
DB search
MKRKREANKEEAMDIVWQTPANPPLPQDYIFRNGFRFVRPYYFEFIAHVKNRWAGKTIVD
LFAEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMAGGVSI
LQNEPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILAR
NATKADNFRQQIEAGLVQKQYIAKVIGEFPKDELIVDANIDYNAREGRSTAEARESAKGK
TASTKFTRISTNGTQSIVLCEPVTGRTHQIRVHLQYSGHPIANDMLYISEQPIDRHIKGS
GADRSARLSNASLTSNFDEVLNEFEENSNGDFGVDSMCTNCPNLAPKGYDGDEEGLWLHC
YRYSGPGWTYECPYPDWAKLS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagagagaagccaacaaggaagaagccatggatatcgtgtggcaaacccca
gcgaatccaccactaccgcaagattacatattccgaaacgggtttcgatttgttagacct
tactacttcgaattcattgctcatgtcaaaaatcgttgggctgggaaaaccattgttgat
ttgttcgctgaggagttcaaaggtcgaccttatgaatattatgttagtgcagtgaaatgc
ggaaggattcaagttgatggggagatggtaccggtttcatacgtggttaaatcatctcaa
aagataagccactttttgcacaggcatgaaccacctgtgatggctggcggtgtttctatt
cttcaaaacgaaccggatgtgctaactgtttgtaaaccggcatctgtcccggtgcatcca
tgtggtcaatatcgtaagaacactgttgttggcatcctccaagcagagcatggattggca
cctctatttcctattcatcgactggatcgccttgtctcaggacttcttattttagccaga
aatgctacaaaagctgacaattttaggcaacagattgaagctggcttagtccagaaacag
tatatagcgaaagtcattggagaatttccgaaggatgagctaattgttgatgccaacata
gactataatgctcgagaaggaaggagcacagcagaggccagagagtctgcaaaggggaag
actgcctctacaaaatttactcggattagtaccaatggtactcaaagtattgttttatgt
gaaccagtcactggccgtacacatcagatacgtgttcatttacagtattcgggacatcca
atagccaatgacatgctatacatttcagagcaacctattgaccgacatattaaaggctca
ggtgccgatagatcagctcgtttatctaatgcttctctaacatcaaattttgatgaagtg
ctcaatgaatttgaagaaaattccaacggggattttggtgttgattccatgtgtacaaac
tgtccaaatttggcacccaaagggtatgacggcgatgaagaaggtctgtggctacattgt
tatcggtactctggaccgggatggacgtatgaatgcccgtatcctgattgggcgaagctt
agctag
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