KEGG   Lotus japonicus: 130717337
Entry
130717337         CDS       T04348                                 
Name
(RefSeq) cleavage stimulating factor 64
  KO
K14407  cleavage stimulation factor subunit 2
Organism
lja  Lotus japonicus
Pathway
lja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130717337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130717337
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     130717337
    U7-dependent histone pre-mRNA processing factors
     130717337
SSDB
Motif
Pfam: RRM_1 CSTF2_hinge CSTF_C partial_CstF RRM_7 RRM_10
Other DBs
NCBI-GeneID: 130717337
NCBI-ProteinID: XP_057423521
LinkDB
Position
5:complement(60100997..60109844)
AA seq 526 aa
MASSQSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDE
ETALSARRNLQGYEINGRQLRVDFAENDKGNDRNREQGRGGPGMTANVDTQKQAGIPVVH
GEAVQHQPIGLHIAISAATAMTAALGGPQSGIHSNQNSLQSQSALAHDPLTLHLAKMSRF
QLIEVISELKGMATQNNDLARQLLLSRPQLPKALFQAQIMLQMVTPQVLQMPNLRMVSDQ
TSPSLANEGPGGQPALLQTLSGLPLYGQNKMQSGLTPYVEEGQVSIMPHNPLAPNQLTAH
SKPPVQPRIPLQHYPTNQVVQIGTMSGQSNLVLPSVRPPSGVGLPIRPPIQPTSSTALNQ
QMQGSLPHSVHVGRSTGAHNIQMVRPDTSFQPGPSTSSSAYSNTGVEKTNMVQDFSESFT
HPSKFMRSDKGRIPSLPAGIKDLPVTIGSSHVLGSSSLPAPTASKAEVRYPEPQSSQPQL
PPDVESVLLQQVLNLTPEQLSSLPPEQQQQVIQLQKSLRQDHMQPS
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcttcctctcagtcccagcatcgttgcgttttcgttgggaatataccgtatgatgcc
acagaggaacagcttattgaaatctgccaggaggttggtcctgtagtatcattcagatta
gttattgaccgagaaaccgggaaaccgaaaggctatgggttctgtgagtataaggatgaa
gagacagctttaagtgctcgtcgaaatcttcagggttatgaaattaatgggcggcagttg
cgtgttgattttgctgaaaatgataaagggaatgatagaaatagagaacagggtcgtggt
gggcctggaatgacagcaaatgttgacactcagaaacaagcaggcattccagttgttcat
ggggaagctgttcagcatcaacctattggtcttcatattgccatatcagcagcaactgcc
atgacagcagctctaggtggtcctcagtctggcatccattctaaccaaaatagtttgcag
agtcagtcagcattggcacatgatcctttaactttgcatctggccaaaatgtccaggttt
caattgattgaggttatctctgagctcaagggaatggctacacaaaacaatgatctggct
cgccagctgttgctttcgaggccacagttgcccaaggcactttttcaggctcagataatg
ctacaaatggtgaccccccaagtgttacaaatgccaaaccttagaatggtttcagatcaa
acctcaccgtctttagcgaatgaaggtcctgggggtcagccagcattgctccaaactctg
tctggcctacctctttatggacagaataagatgcaatctggtttgacaccttatgttgaa
gaaggccaagtcagcatcatgcctcataatcctttggcccctaatcaattaactgctcat
tcgaagcctcctgtgcagcctagaatacccttacaacattatccaaccaaccaagttgta
cagattggaacaatgtcagggcaatctaatttggtacttccttctgtgcgtcccccatct
ggggtcggtttgcctattaggcctccaattcaaccgacaagttcaactgctttgaaccag
caaatgcaaggctctttgccacattcagtacatgttggacgctcaactggggcacataat
attcaaatggttcgtccagatacaagctttcagcctggcccttccacgagtagcagtgca
tattcaaatactggagtagagaaaacaaacatggttcaggatttttcagaatctttcact
cacccatcaaaattcatgagatcagataagggaaggatcccttctcttcctgcggggatt
aaagacttgcctgtcaccattggatcttcccatgttcttggaagtagctcattacctgca
cctacagcctctaaagcagaagtgcggtaccctgagccgcaatcttctcagccccagctt
ccacctgatgtggagtctgttttactgcaacaagtgttgaatctaacaccagagcaattg
agttccttgccaccagagcagcaacaacaggtcattcagctccagaagtctcttcgacaa
gatcatatgcagccttcataa

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