Lotus japonicus: 130717423
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Entry
130717423 CDS
T04348
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130717423
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130717423
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130717423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
AF_0924
Motif
Other DBs
NCBI-GeneID:
130717423
NCBI-ProteinID:
XP_057423624
LinkDB
All DBs
Position
5:complement(59633503..59638244)
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AA seq
458 aa
AA seq
DB search
MGTSNLVLLFFSLLCFSALAAAKVVLIGNNITLSFDDIEANFAPAVKGSGEAGVLYLAEP
LDACTELTNKVEQLPNVSSPYVLLIRGGCSFEEKVRRAQSAGFKAAIVYDNEDGGVLVAM
AGNSAGIRIHAVFVSKASGEILKKYTGFTNVETWLIPTFENSAWSIMAISFISLLAMSAV
LATCFFVRRHRIRRERPRASRVREFHGMSSRLVKAMPSLIFTAVLEDNSTSGTCAVCLED
YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLSEPPPSESTPLLSSTPA
SVASSVLSSVRSSFASSSAIQISRAASQSNHSLASTPCLPPSMRSFRQSPSLSISRSSVD
LRNASQRSLASHLNSAYSIGYPSMSPLNSRYMSPHIPSPSNASVSYIGSSSHQQRTLRYS
ESTASFIGSSSHQQHPLRYSESAASFSPFASANSLPEC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctcgaatcttgtcttgcttttcttctctctgctgtgtttttctgctttggcg
gctgctaaggttgtactgattgggaacaacatcactctctcattcgatgatattgaagct
aatttcgctccggcagtcaaagggtctggagaagctggtgtcttatatttagcagagccc
cttgatgcatgtacagaactgacaaataaagttgaacaacttccaaatgtgtcctcacct
tatgttttgttgattagagggggatgtagcttcgaggaaaaggtgagaagggcacaaagt
gctggcttcaaagctgcaattgtctatgacaatgaagatggtggtgtcttggttgcaatg
gcaggaaattcagctggtataagaatacatgctgtgtttgtatcaaaagcttcgggtgaa
atactaaagaaatacactgggtttactaatgtggaaacatggctcattccgacttttgaa
aactcagcttggtctatcatggccatctcgttcatttccctactagctatgtctgcagtg
ctggccacttgcttcttcgtccgcagacatcgcataagaagagaaaggcctcgagcttct
cgtgttcgtgaatttcatggtatgagtagtcgcctagtgaaagcaatgccaagtttgata
tttactgctgttttggaagataactctacatcaggaacttgtgctgtctgccttgaagac
tattgcgttggagagaagctcagaattcttccctgctgtcacaagtttcatgctgcctgt
gtggattcttggcttacttcatggagaaccttctgtccagtttgcaagcgcgatgctaga
actggccttagtgaaccaccaccttcagaatccacacctctgctctcatcgacaccagca
tccgtggcatcctctgtcttatcttctgtgaggtcatcatttgcttcatcttcagcaata
caaatttctcgggcagcttcacaatccaaccactctttagctagtaccccttgtcttcca
ccatccatgaggtccttccgtcagtccccttccctaagcatcagccgcagctctgtagat
cttaggaacgcttcccaaagatctctagcttctcacttgaattcagcatattccatcgga
tacccatccatgtcacctcttaactcaaggtacatgtctccacacattccgagtccaagc
aatgcttcagtgagttatattggttcttccagtcaccaacaacgtacactccggtatagt
gagtcaacagcaagttttattggttcttccagtcatcaacagcatccactccggtacagc
gaatcggcggcgagcttctcaccgtttgcatctgcaaactccctcccagaatgttaa
DBGET
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