Lotus japonicus: 130717658
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Entry
130717658 CDS
T04348
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130717658
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130717658
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
130717658
NCBI-ProteinID:
XP_057423968
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Position
5:10185607..10188713
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AA seq
307 aa
AA seq
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MIQIMGNIIAPPRNAWGACSKRWLYFLGVNGLTLDGTGVINGHGQSWWGSLNGTEGCTGL
PTALLFERCDGLQISRLTHINGPASHIFVVHSRDVTISGVHINSPKGISHNTDGIDISNT
VRVNIRNSIIGSGDDCIAIKGGSRFINISHVTCGPGHGISVGSLGENGEEEFAEHVNVRN
CTFNGGDSAARIKTWPGGKGYAKAIIYENIIVNQTNYPVYIDQHYMRTPEKKEALEVTDV
TFRNIHGTCTNEHAVVLDCAKIGCDNIKLQQINITSIDLDKPASAICHNVHGTATDVISP
RVTCLHH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatacagattatggggaacataattgcacctccaagaaatgcatggggagcatgttca
aaacggtggctttatttccttggcgtaaatggcttgacacttgatggaacaggagtgatc
aacggtcatggtcaatcttggtggggcagtctgaatggaactgaaggatgcaccggacta
cctacggctctgctatttgaaagatgtgatgggcttcaaataagtagactcactcacata
aacgggccagcatcgcatatctttgtggttcacagccgagatgtaacaatctcaggagtt
cacataaattcaccaaaaggaattagtcacaacactgatggaattgatatctcaaacaca
gttcgggttaacattcgtaactcaataatagggagcggtgatgactgtattgccatcaaa
ggtggctcacgattcatcaacattagccatgttacttgtggacctggtcacgggattagt
gtggggagtctaggggaaaatggagaagaggaattcgcagaacatgtgaatgttaggaat
tgcacattcaatggaggtgatagtgcagctagaatcaaaacatggccgggtggaaaaggg
tacgccaaggctatcatctacgagaatatcatagtgaatcaaacaaattacccggtgtat
attgaccaacattacatgaggactccagaaaagaaggaagcattagaagttactgacgtt
acattcaggaacatacatggcacatgtaccaatgagcatgcagttgtgcttgactgtgcc
aagatagggtgtgacaatattaagctgcaacaaatcaacattacctcaattgatctagac
aagccagcttctgcaatatgccataatgttcatgggacagcaactgatgttatttcacct
cgtgtgacttgtttacatcactaa
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