Lotus japonicus: 130717767
Help
Entry
130717767 CDS
T04348
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
Organism
lja
Lotus japonicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
zf-CCHC
ResIII
CMS1
YgbB
zf-CCHC_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
130717767
NCBI-ProteinID:
XP_057424111
LinkDB
All DBs
Position
5:54356105..54361745
Genome browser
AA seq
756 aa
AA seq
DB search
MASSSSSVAVVSSTYQTPLLELLKRPTTATAFISLDNRSRFSSVLLRTSNLNRTRLRLVS
SAVATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVN
RGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLP
KALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID
LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS
RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK
KDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL
VIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPAT
QEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGFSRPPSSRS
LINQEQGCITLQLTRDLDALHGKYLSARSVTGFLSDVYSPAADEVGKIHLIADERVQGAV
FDLPEDIARELLKKDIPPGNTISLITKLPALQDDEPTSDYYGRFSDRGQSNRRGGSRDRG
GFRSSSSGWGGDRSSDDEFGNTYGRGGRGGRGGRSYGSGNSRSGMGRRSSGDDWLIGGGR
SSRSSPSNRGSSGGACFNCGQSGHFAAECPKKRNSF
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttcttcttccgtcgcggttgtttcctccacataccaaacccctcttctc
gaactcctcaaacgaccaaccaccgcaacagccttcatttctctcgacaaccgctcccgc
ttcagctccgttcttctccgaacttccaacctcaacaggacccgcctccgccttgtttct
tcagccgttgccaccccgaactcctccgtcctcaccgccgaagaagccttcaagggtctt
gctcttgacgacgttaacgctgacgggtatgaccttgctcctcccaccactgtcagcaac
gacgagctcgacatttctaagctgggtttgccttctgaactcgttcgttcgcttgtcaac
cgtggaatcactagtcttttccccattcagagagctgtgttagttcctgcactggaaggg
aaagatatcattgctagagcaaagactggaactggaaagaccttagcatttggaattcca
attatcaaaggtgtcactgatgattcacaaagtcctcagaggcggtctgggcgtcttcct
aaggcgttggtacttgcgccgactagggagttagcgaagcaggtcgagaaggagataaaa
gaatctgcaccttacctgagcacagtctgtgtttatggtggtgttgcttatgcaacacag
caaaatgcactttcgcgtggtgttgatgttgtggttggaacacctggcagaataattgac
ctagtaaatgggaacagccttagactgactgaggttcagtatttggtccttgatgaagct
gatcagatgcttgctgttgggttcgaggaggatgttgaaacaattttacaaacggtccca
actgggcggcagaccatgcttttttctgcaaccatgccgggttgggtgaagaaattgtca
agaaaatatttgaacaaaccattgacaattgatttggtcggtgaggatgaagagaagctt
gcacacgggatcaagctatatgctgtatcagccactacaaattcaaagcggacaatgctt
tccgatcttgtaactgtctatgcaaagggtgggaagactattgttttcacgcggacaaaa
aaagatgctgatgaagtatcattgtcattaacaaatagtatagcttctgaagcactgcat
ggtgatatctctcagcatcagagagagagaacgttgaatggtttccggcaaggaaaattc
acagtgcttgttgccactgatgttgcctctcgtggacttgatattcctaatgttgatttg
gttatacattatgaacttcccaatgatcctgagacttttgtacatcgctctggtcgtacc
ggtcgtgcaggaaaagagggtactgccattctgatgtataccagtaaccagaggagaact
gttagatcccttgagcatgatgtaggctgcaaatttgaatttgttagtccaccagctacg
caggagattttggaatcatctgccgagcaagttgttgctgcacttagtagagttcatcct
gaatctgttgaatttttcaccgcaactgcacaaaaactagttgaggaacgaggaacaagt
gtccttgcagctgcactagcacaactgagtgggttctctcgacctccatcatcccggtct
cttatcaatcaggaacagggatgcattacattacaactaactcgagatctagatgctctt
catggaaaatatctttctgctagatcagtcactgggtttctttctgatgtttattctcca
gctgctgatgaagttggaaaaatacatttaattgcagatgaaagggttcaaggagctgtt
tttgatcttccggaggatattgctagagagttgctcaagaaggacataccccctggaaac
actatttccttgatcaccaagttacctgctttgcaagatgatgaacctacaagtgattac
tatgggaggttttctgacagaggtcaaagcaaccggagggggggttctagggatcgggga
ggttttagaagctcctcatcgggatggggtggggaccgaagctctgatgacgagtttggc
aatacatatgggagaggggggagaggtgggagaggtggtagaagttatggatccggtaac
agcaggtctggaatgggaagaagaagcagtggggatgactggctaattggaggtggacga
tcaagcaggtcttcaccatcgaacagaggcagcagtggaggtgcctgttttaattgtgga
caatctgggcattttgcagcagagtgtcccaaaaaacggaactcattttag
DBGET
integrated database retrieval system
