Lotus japonicus: 130717791
Help
Entry
130717791 CDS
T04348
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130717791
Membrane trafficking [BR:
lja04131
]
Protein recycling
Others
EARP complex
130717791
Endosome - Golgi transport
Tethering complex
GARP complex
130717791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
130717791
NCBI-ProteinID:
XP_057424134
LinkDB
All DBs
Position
5:50834324..50845107
Genome browser
AA seq
699 aa
AA seq
DB search
MADVAGSTVSPSSTFDLGAFVGDLTIEEDLSSDDISLEGLQQELEECKNDEVVANILSKG
TKLRDYAKGVENDLRKVELDSIQDYIKESDNLVSLHDQIRDCDSILSHMETLLSGFQAEI
GSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDGEVNEEYMRT
LEILSKKLKFVEVDPMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYALRKPKTNIQ
ILQQSVLLKYKYVVTFLKEHGKEVYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIAT
SNDLIGVEARSSGGLFTRAWEPLKNRSAVFALGDRLNILKEIDEPALIPHIAEASSTKYP
YEVLFRSLQKLLMDTATSEYNFCDDFFGEQHMFYEIFAGPFGVIDEHFNSILPNCYDAIG
LMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNIALWPRFKMVFDMHLNSLRNANVKTLWED
DVHPHYVMRRYAEFTASLIHLNSEYGDGQLELNSERLRMAVDDLIIKLAKNFTKPKQQTV
FLINNYDMTIAVLKEAGPEGGKIQMHFEELLKSNTALFVEELLQEHFNDLIKFVKARASE
DPTASPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLL
YYTRLSDCIKRIVGGSALNKDLVSISSIMYEIRKYSRTF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtcgccggaagcacagtgagtccatccagtacatttgatctgggagcattc
gttggcgacctaaccatcgaagaggatctaagcagtgatgatatttcattggaaggatta
caacaggagcttgaagaatgtaaaaatgatgaggtagttgcgaacattctatccaaaggt
acaaaacttagggattatgcaaagggagttgagaatgatctgcgcaaagttgaattggat
tcaattcaggattatattaaagaaagtgataatctagtctctcttcatgatcaaattcga
gattgtgatagtatcttgtcacatatggaaactcttcttagtggatttcaggctgagatt
ggttccattagttcagacattaagattctgcaggagaagtctatggatatgggtttgagg
cttaagaatcgcaaggtagctgagtccaaattggctaagtttgtggaagacataattatc
cctccaaggatggtggacatccttgttgatggagaggtcaatgaggaatatatgagaact
cttgagattttgagtaagaaactgaaatttgtagaagttgacccaatggtcaaagcttca
aaagctctaaaagatgttcagcctgagcttgaaaaactccggcagaaagcagtctccaag
gtgtttgacttcattgttcagaaactctatgcattgagaaaacccaaaacaaacatccaa
atacttcaacaaagtgtccttttaaagtacaagtatgttgtaaccttcctcaaggaacat
ggcaaggaagtctataatgaagttcgagcggcttatattgacacaatgaacaaggttctt
agtgctcatttccgtgcttacatacaagcattggagaaactacagttggatatagcaacg
tctaatgatttaattggtgtagaggcaagaagcagtggtggtctttttacaagagcgtgg
gaaccactaaagaatcggtccgctgtttttgctcttggggacaggcttaatatattaaag
gaaattgatgaaccagcattgattcctcatatagctgaagccagctctactaaatatcca
tatgaggttctgttcaggagcttgcagaagctgcttatggacactgctacttcagaatat
aatttctgtgatgatttttttggagaacaacatatgttctatgaaatttttgcaggtcct
tttggtgtcatagatgagcacttcaattcaatacttccaaattgctatgatgctattggt
ctaatgcttatgattcgcataatacaccaacatcagctcattatgtctcggaggcggatt
ccatgcttggattcttatttagacaaggtcaacattgccctatggcctcggtttaagatg
gtatttgatatgcatctcaacagcctccgtaatgccaatgtgaagacgttatgggaagat
gatgttcatcctcattatgtcatgaggcgctatgctgagtttactgcttcgcttatccac
ttaaactctgagtatggagatggtcagcttgaattgaattcagaaagacttagaatggct
gttgatgatttaattatcaagcttgccaagaatttcaccaaaccaaaacaacaaacagtg
tttcttataaacaactatgatatgaccattgctgtcctgaaggaggcaggtcccgaaggt
gggaaaattcaaatgcactttgaggaactactgaagagcaatacagcattatttgtggaa
gaacttctccaagagcatttcaatgatttaatcaagtttgtaaaggccagagcatctgag
gacccaacagcaagtcctgataaacctataactgttgccgaagtcgaaccactagttaag
gattttgcaagtaggtggaaggctgcaatagagctgatgcataaagatgtcatcacgtct
ttcagcaactttttgtgtggcatggaaatattaagagctgcattgacccagttgttactt
tattatacaagactctcggattgcatcaagaggatcgttggcgggtctgcattgaacaag
gatcttgtttccatatcttctatcatgtatgagattaggaaatactcaaggactttctga
DBGET
integrated database retrieval system
