Lotus japonicus: 130717827
Help
Entry
130717827 CDS
T04348
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1
KO
K08517
vesicle transport protein SEC22
Organism
lja
Lotus japonicus
Pathway
lja04130
SNARE interactions in vesicular transport
lja04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130717827
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130717827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130717827
Membrane trafficking [BR:
lja04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
130717827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
130717827
NCBI-ProteinID:
XP_057424185
LinkDB
All DBs
Position
5:61867870..61870158
Genome browser
AA seq
224 aa
AA seq
DB search
MVKLTVVGRASDGLPLAQGLRYTNEENGSYLSCYKQQAEFILKEISKGALMASKMTIRID
HYCFNYLVEKGIVFIVLCESTYPRKLAFHYLQDIQKEFEKFDKTLIGKITKPYSFVKFDG
IIANFSRQYIDTRTQANLSKLNVNRKRELDVVAEDMSNILERRRISETMRRLSNTPQQPA
SSIWGSPRLEVIAMKWTPIMIIVISSVALLWASLVLTDDYIFPS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggttaaattaactgtagttggaagggcaagcgatggattacctctagcacaaggactg
agatacacgaatgaagagaatggctcctatctttcatgttacaagcaacaagcagagttc
attctaaaagagatttcaaagggagccttgatggcttccaagatgaccattcgcattgat
cattactgcttcaactacctggtcgagaagggaattgttttcattgttttgtgtgagtcc
acttacccaagaaaactggctttccattacctacaagacatccaaaaggagtttgaaaag
tttgataaaacccttatagggaaaatcacaaagccatacagctttgtcaaatttgatggt
ataattgcaaactttagcagacaatacattgatacaagaactcaagccaacctatcaaaa
cttaatgttaatcggaaaagagagttagatgttgttgctgaagacatgtccaatatttta
gaaaggaggagaatttcagaaacaatgagaaggttatcaaatactcctcaacaacctgca
tcttcaatatggggctccccacgccttgaggtgattgcaatgaaatggacacctatcatg
atcattgtcattagttcagtggctcttttgtgggctagcttagtcctcacagatgactat
atttttccaagctga
DBGET
integrated database retrieval system
