Lotus japonicus: 130717907
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Entry
130717907 CDS
T04348
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130717907
Membrane trafficking [BR:
lja04131
]
Protein recycling
Others
EARP complex
130717907
Endosome - Golgi transport
Tethering complex
GARP complex
130717907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
CENP-F_leu_zip
Tma16
Sec8_N
Prominin
Laminin_II
Motif
Other DBs
NCBI-GeneID:
130717907
NCBI-ProteinID:
XP_057424291
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Position
5:55294715..55304202
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AA seq
768 aa
AA seq
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MAVDELPLDDKAKRMRDLLSSFYSPDPSMSSDTSSKLASRDDINSPSFDPDHYMNLQVHK
SNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMESNMEQLL
DKIISVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKAEAYADAV
RFYTGAMPIFKAYGDSSFQDCKQASEEAMATIVKNLQGKLFSDSESIQVRAEAAVLLKQL
DFPVNSLKAKLLEKLEQSITDIQLNPKELNNASGDLSPSASAHEAAIHEFVEAVRAFRVI
FPDSEEQLVKLAQDLVMKNFVITEEYVKTRIIPADLLGVLRVIWNDVLLIDEVLPEAVLS
THSLEAAKFVVTLYVRNAFSHLLQDISDSLLQVLKKDGAEQYSLETVFGSSTKAVLQGCL
TVLQDFGKILDDDSGILVRLRELFIDWVQEGFQDFFRQLEDQFLLFSGRTSSPAIQVHGL
AEGAQGDKAFASLVLVLAQLSAFIEQTVIPKITEEIAASFSRGSLRGYESGPAFVPGEIC
RKFRSGREKFLHLYINMRTQRISLLLKKRFTTPNWIKHKEPREVHMFVDLFLQELEVIGN
EVKQILPQSARKHRRTDSNGSSVSSRSNPLREEKLGRSNTQKARSQLLETHLAKLFKQKV
EIFTKVEYTQESVVTAIVKFCLKSLQEFVRLHTYNRSGFQQIQLDIQFLRIPIREIVEDE
AAIDFLLDEIIIGTAERCLDPIPLEPPILDKLIQAKLAKTKEQNTISS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagatgaattgccactggacgacaaagcaaagaggatgagagatcttctctcc
agtttctactctccagacccatccatgtcctccgacacctcctccaaactcgcctctcga
gacgacatcaactccccttccttcgatcccgatcactacatgaatctccaggtgcacaag
tccaatttggaaggactgcttcagcggcatgttgaaatggccgctgaaatcaagaatctc
gacactgacttgcaaatgctggtctacgagaattacaacaagttcatcagtgctacagat
accatcaagaggatgaaaagtaacatttcggggatggagtcgaatatggagcagcttctt
gacaagataatatcagtgcagtcaaggagtgacaatgtcaacacttcactatttgacaaa
agggagcatatcgagaaactgcatcgaacttgcaatcttcttcggaaagttcagttcata
tatgatctacctgatagacttggcaagtgcatcaaagcagaggcgtatgcagatgcagtt
cggttttacactggtgcgatgccaatttttaaggcatatggagattcatcatttcaggat
tgtaagcaagcatctgaagaagcaatggctaccatagtaaaaaacttgcagggaaagcta
ttttcagattctgaatcaatacaagtgagagctgaggctgctgtactccttaagcagtta
gattttccggtgaacagtttaaaggcaaagttactagaaaagttagaacagtctattact
gacattcagctgaaccctaaagaactaaataatgcttcaggggacctttctccttcagca
tctgctcatgaggcagccattcacgaatttgtggaggcagttcgtgcttttcgagtaata
tttcctgattcagaagagcaattggttaaacttgctcaggacttggttatgaagaatttt
gtaattaccgaggaatatgtaaagacacggattatcccagcagatcttcttggtgttctt
cgagttatctggaatgatgtactcttgatagatgaagtcttaccggaagcagttctctct
acccattctcttgaggctgcaaagtttgttgtgacattgtatgttagaaatgcattttct
catcttctgcaagatatctcagattccctcttacaagtcctgaaaaaggatggagcagag
cagtactctcttgaaactgtttttggatctagtacaaaagctgttctccaaggatgcttg
acagtcttgcaggacttcggcaaaattttagatgatgactctgggatcctagttagacta
agggagttattcattgattgggtccaagaaggatttcaagacttttttaggcaacttgaa
gaccagttccttctattttcaggaagaactagttctcctgctattcaagtacatggtttg
gcagagggagctcaaggggacaaagcatttgctagccttgtcctagtgctggcacaattg
tctgcttttattgaacaaactgttatcccaaaaatcactgaggaaatagctgcttcattt
tctcgcggcagtcttagaggctatgaatctggacctgcctttgttccaggagaaatatgt
cgaaaatttcggtcaggccgtgaaaaatttctgcacctgtacataaatatgagaactcag
aggatatcacttctcctgaagaaaaggtttaccacacctaattggattaagcataaggag
ccaagagaagttcatatgtttgtcgatttatttcttcaagagcttgaagttataggtaac
gaagtgaagcagattttgcctcagagtgcgcgcaagcaccgcaggacagatagtaatgga
agcagtgtttcatcgaggagcaaccccttacgagaggagaaattgggtaggtcgaacact
caaaaagcaaggagccagcttttggaaacacacctagcgaagctgtttaagcaaaaagtt
gaaattttcacgaaagtagaatatacacaggagtctgttgttacagctatagttaaattt
tgccttaaaagtttacaagaatttgtcagactacatacttataaccggagtggattccag
caaattcaattagatattcagttcctaaggattcctataagggagatagttgaagatgaa
gctgcaatcgacttcttgcttgatgagataattattggtactgcagagcggtgtcttgat
ccaattccattggagcctcccatactggacaaacttatacaagctaagttggctaaaacc
aaggaacaaaatacaatctcttcataa
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