Lotus japonicus: 130718003
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Entry
130718003 CDS
T04348
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130718003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130718003
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
130718003
Prokaryotic type
Archaeal type
TFB
130718003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
130718003
NCBI-ProteinID:
XP_057424417
LinkDB
All DBs
Position
5:32525705..32529662
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AA seq
312 aa
AA seq
DB search
MSDAYCGDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTMISNPKGGSGDFLSSSLGRWQNRGSNPDRTLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSIANGATK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISITAAVIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcttactgcggcgattgcaagcggcagacggaggtggtgttcgatcactcg
gcgggcgacaccgtgtgctcggagtgcggcctggtgctcgagtcccactccatcgatgaa
acctccgagtggcgcaccttcgccaacgagtccggcgacaacgaccccgtccgtgttggc
ggcccctccaaccctctcctgaccgacggcggcctttccaccatgatttctaaccctaaa
ggcggctccggcgatttcctctcctcctccctcggccgctggcagaatcgcggctccaac
cccgatcgtaccctcatcctcgccttcaagaccatcgccaccatgtctgataggttggga
ctcgttgcaaccatcaaggatcgtgcaaatgagatatataagagggttgaagatcaaaag
tctagtagagggagaaatcaagacgctttattggctgcttgtctctacattgcttgccga
caggaagacaaacctcgtactgtaaaggaaatttgctctattgccaatggggctacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactgggtttggagaagggtcag
tctgtggagatgggtacaatacatgctggggactttatgaggagattctgttccaatctc
ggcatgaataatcaagctgttaaagctgctcaggaagctgttcagaaatcagaagaattt
gatataaggaggagtcctatatcaattactgcagctgttatctacatcataactcaactc
tctgatgataaaaaacctctcaaagatatatcaattgcaacaggagttgcagaaggaaca
attaggaactcctacaaggatctttatccccatgtttcaaaaataataccaacttggtat
gctaaggaggaggatttgaagaacctttccagtccttga
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integrated database retrieval system
