Lotus japonicus: 130718118
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Entry
130718118 CDS
T04348
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
lja04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130718118
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130718118
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
130718118
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130718118
03036 Chromosome and associated proteins [BR:
lja03036
]
130718118
Protein phosphatases and associated proteins [BR:
lja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130718118
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130718118
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130718118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
Adaptin_N
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
130718118
NCBI-ProteinID:
XP_057424571
LinkDB
All DBs
Position
5:65862637..65869140
Genome browser
AA seq
585 aa
AA seq
DB search
MADEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLIENNDDDDE
VLLAMAEELGVFIPYVGGVEHASVLLPPLETLGSVEETCVRDKAVESLCRIGSQMRESDL
VEFFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPENSKTELRSIYNQLCQDDMPMVRRS
AAANLGKFAATVEYAHLKADIMSIFEELTQDDQDSVRLLAVEGCAALGKLLEPQDCVSHI
LPVIVSFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAG
KVTKFCRILSPDLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPI
FLCLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIP
LLASQLGVGFFDDKLGNLCMQWLQDKVHSIREAAANNIKRLAEEFGPDWAMQNIIPQVLD
MINNPHYLYRMTILRAISLLAPVMGSEITCSKLLPVVVSASKDRVPNIKFNVAKVLESIF
PIVDQSVVEKTIRPCLVELSEDPDVDVRFFSNQALQAIDHVMMST
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaaccactatatccaatagcggtgcttatagacgagctcaaaaacgatgat
atccagctgcgtttgaattcaattcgcaggctatcgacgattgcgcgtgctctcggggag
gagcgaacgcgtaaagagttgattccgtttttgattgagaataatgatgatgatgatgag
gtgcttcttgccatggcagaggagttgggagtatttattccttatgttgggggagtggag
catgccagtgtgttgcttccacctcttgagacacttggcagtgttgaggaaacttgtgtg
agggataaagctgtggagtcactttgtagaattggatctcagatgagggagagtgatttg
gttgaatttttcatacccttggtgaagagattggcagcaggtgagtggtttactgcccga
gtctctgcatgtggactattccacattgcatacccaagtgctccagaaaactcgaagaca
gagctgagatcaatatacaaccaattatgtcaggacgacatgcctatggttagaagatct
gctgcagcaaaccttgggaaatttgctgcaactgttgaatatgctcatttgaaggcagac
attatgtcaattttcgaggaacttacgcaggatgatcaagattctgtcagattgttggct
gtggagggctgtgctgctcttggcaagctgttggagccacaagattgtgtttcccatata
ctcccggttattgtcagtttctcccaggataagtcttggcgtgtgcgttacatggttgca
aatcagttatacgagctctgtgaagctgtaggccctgaacctaccagaacggaattggtc
cctgcctatgtgcggttgcttcgagataatgaagctgaagtacgcatagcagctgccgga
aaagtaactaagttttgccggattttaagtccagatcttgcaattcagcatattcttcct
tgtgtgaaggaattgtcatcagattcttctcagcatgtccgctctgctttggcttctgta
ataatgggaatggctccagtgttaggaaaggaagcaacaattgagcagcttcttcctatt
ttcctttgccttttgaaggatgaatttcctgatgtgcgcctaaacatcatcagcaagctt
gatcaagtgaatcaggttatcggaatcgatctgttatctcaatctttattaccagcaatt
gttgagcttgctgaggataggcattggagggtccggcttgcaattatagagtatataccc
ttattggcaagtcaattgggggttggttttttcgatgacaagcttggcaatctctgcatg
cagtggttacaagataaggttcattcaattcgtgaagcagctgccaacaacataaaacgt
cttgctgaagaatttggtcctgattgggctatgcagaacataattccacaggttttggat
atgattaacaatccacactatttgtatcggatgaccattcttcgagctatctccctgctt
gctcctgtaatgggatctgaaatcacttgttcaaaattattgccagttgttgtttcagca
tcaaaggacagagtgcccaacataaagttcaatgtggcaaaagtattagagtccatcttc
cccattgttgatcagtctgtggtggagaagacaatccgcccttgtctagttgagctcagt
gaggatcctgatgttgacgtgcgattcttttccaaccaagcgctccaggcaattgatcat
gtcatgatgtctacctag
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integrated database retrieval system
