Lotus japonicus: 130718210
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Entry
130718210 CDS
T04348
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like isoform X1
KO
K12819
pre-mRNA-processing factor SLU7
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130718210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130718210
Spliceosome [BR:
lja03041
]
Complex C
Other components
Step II factors
130718210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Tudor_3
Motif
Other DBs
NCBI-GeneID:
130718210
NCBI-ProteinID:
XP_057424715
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Position
5:complement(48333008..48341425)
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AA seq
540 aa
AA seq
DB search
MATASATFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP
SLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGAKW
TNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEAREEARRKYLKEQQLKKLE
KKNKKQRGENESSDDDEYEDEDAHALKVDEAKVDESKQADFAKVEKRVRTTGGGSTGTVR
NLRIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFK
QLNIHAWEAFEKGQDVHIQAAPSQAELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEEL
PKELLLGQTERQVEYDRAGRIIKGLEASLPKSKYEEDVYINNHTSIWGSWWNDHQWGYKC
CKQTIRNSYCTGAAGIEAAEAAADLMKANIDRKVASEDTPAPAEEKRLATWGTDVPDDLV
LDQKKLDEALRKEDERKREEKDERKRKYNVRWNDEVTPEEMEAYRVKKIHHDDPMKDFLH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagcaacctttaaatctagggaggaccacagaaaacagattgaattg
gaagaggcacgtaaagctgggcttgcaccagctgaggtagatgaagatgggaaagagatt
aaccctcatatcccccaatatatgtcttctgctccatggtatctgaatgctgagaaacct
agtctaaaacatcaaaggaaatggaaatctgatccgaattatacgaagtcttggtacgac
agaggagcaaaaacatttcaggctgacaattacaggaagggagcatgtgaaaactgtggt
gcaatgacacataatacaaaatcatgcgtggagaggcctcggaagcttggagcaaaatgg
accaacatgcatatcgctcctgatgaaaagatagaaacatttgaacttgattatgatggc
aagagagatcgatggaatggttatgatccagccacctatgctcgtgtcattgaaagatat
gaggcaagggaagaggctcggaggaagtatttaaaagaacagcaattaaagaaactggag
aagaaaaacaaaaagcaaagaggggaaaatgagtctagtgatgatgatgaatatgaagat
gaagatgctcatgctctaaaggttgatgaagccaaggttgatgagagcaaacaggcggac
tttgccaaggttgaaaagcgtgttagaacaacaggaggtggtagtacaggaactgtaaga
aacttgcgtatccgagaggacactgcaaaataccttctgaatcttgatgtcaattctcct
tattatgatccaaaaacccattctatgcgagaggatccccttcctgatgctgatcctaat
gagaagttctatggaggagacaaccagtatagaatgagtggacaagctttggagttcaag
caacttaacattcatgcctgggaagcatttgagaaaggccaggatgtccacatacaagct
gcaccttcccaagctgaattactatataagaattttaagataatgaaagagaagttgaag
tcacaaacaaaagatgccataatacagaagtatggaaatgcagcagcccaagaagagctt
ccaaaggagcttcttttggggcaaactgagagacaagtcgaatatgatcgcgctggcaga
attataaaaggcctggaggcatcccttccaaaaagcaagtatgaagaggatgtgtacatt
aataatcacacaagcatatggggttcatggtggaatgatcatcaatggggatacaaatgt
tgcaagcaaactatacggaacagttactgcactggcgcagcaggaattgaggctgctgag
gcagcagcggatttaatgaaggcaaacattgatcgtaaagtagcatctgaagatactcct
gctccagcagaggaaaaaaggcttgctacttggggaactgatgtacctgatgatctggtc
ctggaccagaaaaaacttgatgaggcccttagaaaggaggatgaaaggaagagggaggaa
aaagatgaaaggaaacgcaagtataatgttagatggaatgatgaggtcactcctgaagag
atggaggcatatcgcgtgaaaaagattcatcatgatgatcccatgaaagattttctgcat
tag
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