Lotus japonicus: 130718326
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Entry
130718326 CDS
T04348
Name
(RefSeq) RAN GTPase-activating protein 2-like
KO
K14319
Ran GTPase-activating protein 1
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130718326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130718326
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130718326
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_8
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
130718326
NCBI-ProteinID:
XP_057424888
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All DBs
Position
5:63434501..63437656
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AA seq
563 aa
AA seq
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MELNSQNRPFSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDKEEAEENAKKIED
AAFVTANLHYEKEPDGDGGSAVQLYAKECSKLLLDVLKRGPSEKDSKEVVAADITTPEKD
SKEVEGADITTTEKDSKEVVADDITTTASTKSVFDISKGQRAFIEAEEAQELLRPLQVPG
NSFTKICFSNRSFGLGAAKVAQPILISLRDQLKEVDLSDFIAGRPETEALDVMKIFSAAL
EGSVLKSLNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPSTEK
LKVLHFHNNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTHLQRI
DLRDNMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEVLEMS
GNEISVEAAPAIAAFIAGKQCLAKLNFSENELKDEGAIKISKALEGLVQLKEIDLSSNQI
TGAGARELALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDVLGPLNDNDPDGEDN
DEESDEEDGEDELESKMKSLSVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaattcgcagaacaggccattttcaatcaaattatggcctcctagtcagaac
actaggcagacacttgtggagaggatgaccaataatctgactactaaatctatcttcact
cagaagtatggaactttggacaaggaagaggctgaagagaatgcaaaaaaaatcgaagat
gcggcttttgtcacagcaaacttacattatgagaaagagccagatggtgatggaggttct
gctgtccaactttatgccaaagaatgtagcaagctcctcctagatgtgcttaaaagagga
cctagtgaaaaggatagcaaagaagtggtagcggctgatattaccacccctgaaaaggat
agcaaagaagtggaaggggctgatattaccaccactgaaaaggatagcaaagaagtggta
gcggatgatattaccaccactgcatctaccaaatctgtttttgatatatctaaaggccaa
agggccttcattgaagcagaagaggctcaggaacttttgaggccattacaggttcctgga
aattctttcaccaaaatatgcttcagcaacagaagttttggattaggagccgcgaaagtt
gcccaacctattcttatttccctcagggaccagttgaaagaagtagatctgtcagatttt
attgccggaagacctgaaactgaagcactagatgtcatgaagattttctcagctgctcta
gagggcagtgtcctgaagtctttgaacctatctgacaatgctttaggcgagaaaggtgta
agagcatttgaagctctcttgcaatcacagaacttcttggaggagctttatctgatgaat
gatggaatctcggaggaagctgctcaagcagtttgtgagttgattccttccacagagaag
ctcaaagttcttcattttcataataatatgactggagatgaaggggcactatctatagct
gagattgtgaagcgttctccttcattggaggattttcgctgttcctccacaaggataggc
actgaaggtggagttgccttagctgaagctttagggaattgtacccatctgcaaaggatt
gatttgcgagacaacatgttaggtgtagaaggcggggtttctctgagcaaagctcttatc
aagcatccagagttaagagagatatacctgagctacctgaacttggaaaatgatggtgca
attgctgtactcgatgctctgaaggaatcagctcctcatcttgaagttctcgagatgagt
ggaaatgaaatttcagttgaggctgctcctgcaatagcagccttcatagcaggaaaacag
tgtcttgccaagttgaacttctctgagaatgaactcaaggatgaaggtgccatcaaaata
agtaaggcactggaaggccttgtccagttaaaggaaattgatctgagtagcaaccaaata
actggggctggggcccgagaattggctctgactgtggtgcagaaggctgatttcaaatct
ctgaacatcaatggaaacttcatttccaatgaaggcattgatgagttgacggatatatta
aaaaattctcctgacgttcttggtccattaaatgacaatgatcctgatggagaagacaat
gatgaagaatctgatgaagaagacggtgaggatgaactggaatccaaaatgaaaagcctt
tcagttgactga
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