Lotus japonicus: 130718374
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Entry
130718374 CDS
T04348
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
lja
Lotus japonicus
Pathway
lja00906
Carotenoid biosynthesis
lja01100
Metabolic pathways
lja01110
Biosynthesis of secondary metabolites
Module
lja_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130718374
Enzymes [BR:
lja01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
130718374
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
GDI
Thi4
FAD_binding_3
GMC_oxred_N
Pyr_redox_2
Motif
Other DBs
NCBI-GeneID:
130718374
NCBI-ProteinID:
XP_057424941
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Position
5:20633274..20640438
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AA seq
615 aa
AA seq
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MLTFPFLSISCVSPLLTHHRIPMLGAFQNLEFQPKFQSVASGDCRGSGFASGSCCNAPRR
CNMRQKPRRRKGVLVVSSKSTLSVEEQVAERVNGGGGFDAIVIGSGIGGLVAGTQLAVKG
ARVLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCKMQVVP
DPTTVHFHLPNNLSVRVHREYDKFIEELTCYFPHEKEGILKFYGECWKIFNALNSLELKS
LEEPLYLFGQFFQKPLECLTLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQ
TPMINAAMVLCDRHFGGINYPLGGVGGIAKSLAKGLADQGSEILYKANVTSVIIEQGKAV
GVRLSDGREFFAKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKS
EVLPPDTDCHHFMLENNWSKLEEPYGSIFLSIPTILDSSLAPEGHHILHIFTTSSMDDWK
GLSVEEYEAKKQLVADEIISRLEKKLFPGLRSSIDFIEIGTPKTHRRFLARNEGTYGPMP
RGIPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVL
DTALLGLLGWLRTLA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgctcactttcccttttctctccatttcctgcgtttctcctcttctcacccaccaccgt
atcccaatgttgggtgcttttcagaacctcgaatttcagccaaagtttcaatctgtagcc
tctggagactgcagaggaagtggtttcgcatctgggtcttgctgcaatgctccgaggcga
tgcaatatgagacagaaacctcgtagaagaaaaggggtgttggttgttagttcaaagtcg
acgctgagtgtggaggagcaagtggcggagagagtgaacggtggtggagggtttgatgca
attgttatagggtctgggattggagggttggttgcagggactcagcttgcagtgaagggt
gctagagttttggttttggagaagtatgtgattcctggtggaagctctgggttttaccag
agggatgggtatacttttgatgtgggttcttctgtcatgtttggtttcagtgataagggt
aatctcaatttgataacacaagctctggaagcagttggttgtaagatgcaggtggtaccg
gatccaacaactgttcatttccatctaccaaacaacctctctgttcgagtgcacagagaa
tatgacaaattcatcgaagagttgacctgttattttccccatgaaaaggagggtatcctc
aaattctatggtgaatgctggaagattttcaatgccctgaattcgttggaattgaagtca
ctagaggaaccgctctacctttttggacagttttttcagaagccgcttgaatgcttgaca
ctagcctattatttgcctcaaaatgctggtgccatagctcggaagtacattcaggatcca
cagttgttgtctttcatagatgcagagtgttttatagtgagcaccgtcaatgctttgcag
actccaatgatcaatgctgccatggttctatgtgacagacactttggtgggattaactac
cctcttggaggtgttggtggaattgcaaagtccttggcaaaaggcttagctgatcagggt
agtgagattctttacaaggcaaatgtcactagtgttataattgagcagggcaaagctgta
ggagtgaggctttcagatggcagggaattctttgctaaaaccataatatcaaatgctact
agatgggatacatttgggaagttactaaagggagagacacttccgaaggaggaagagaac
ttccagaaagtttatgttaaagctccatcttttctttcaattcacatgggggttaaatca
gaggttttgccaccagatacagattgtcaccattttatgcttgagaataactggtccaaa
ttggaggagccatatggaagtatctttttaagtataccaactattcttgattcatcgttg
gctcctgaaggtcatcatatccttcacatattcacaacttcttcaatggacgactggaag
ggtctctcagttgaagaatatgaggcaaaaaagcagctagtagctgatgaaatcatcagc
agattagagaagaaattgtttccaggtcttagatcatccatcgattttattgagataggg
acaccaaagacacaccggcgattccttgctcgtaatgagggaacttatggaccaatgcca
cgtggaattccaaaggggttgttgggaatgccgtttaataccacagcgatagatggtctt
tactgtgttggagacagctgtttccctggacaaggtgttattgctgtagctttctcagga
gttatgtgtgctcatcgtgtagctgcagatattgggttggagaaaaagtcacctgttttg
gataccgcactgcttgggttgcttggttggttaagaacactggcatga
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