Lotus japonicus: 130718449
Help
Entry
130718449 CDS
T04348
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9
KO
K14487
auxin responsive GH3 gene family
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130718449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Phage_H_T_join_2
Motif
Other DBs
NCBI-GeneID:
130718449
NCBI-ProteinID:
XP_057425025
LinkDB
All DBs
Position
5:56038013..56041692
Genome browser
AA seq
599 aa
AA seq
DB search
MDGKKLEYKGEEALKEIEKLTNNGAEIQESLLKQILTQNRETEYLNKYVKGDEKTDIAEF
KRCVPVSSYEEIFSYIQRIANGEDSSIITGQPITEMLISSGTSGGEPKMMPTIAEDLDRR
TFLYNLITPIISKYIPGLDEGKGMFLNFVKSEMSTTPCGLPVRTVLTSYYKSKHFKCRTR
DPWNDFTSPDQTVLCNDVNQSMHCQLLAGLIQRHKVLRLGAVFASAFLRAISFLERNWQS
LCDDIRRGELSSFVTDPGCCSAMSSVLSSPNPDLADEISEICSHKCWKGILLKIWPKAKY
IEAVITGSMAQYIPALEHYSGGKLPLVASMYASSECYFGVNLKPLSDPADVAFTLLPNMC
YFEFLPLGQNGTLLMDFEEGHVPNDKLVDLKNVKLGCFYEILVTTFAGLYRYRVGDVLQV
VRFYNKAPQFRFICRRNVVISIDSDKTSEEDLHKSVTEAKKLLKPLDALLVDYTSYPDTS
SVPGHYILYWEILHCGSKGSGEPLDTNVLQECCSVVEEQLDYVYRHLRNDKSIGPLEIRV
VEPGTFEALMDLSISNGASVNQYKTPRCIKSSKAFNLLNSRVNASFFSPRVPSWGSKLC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaagaaattggagtacaaaggtgaggaagcattgaaagagatagagaagctc
acaaacaatggtgctgaaattcaagaaagccttttgaaacagatcttaacacagaatagg
gaaactgagtacttaaacaagtatgtgaagggagatgagaaaactgacatagcagagttt
aagaggtgtgttcctgttagcagttatgaagagatcttctcatatatccagagaattgca
aatggggaagactcttctatcatcactggtcaaccaatcacagagatgttaatcagttca
ggaacatcaggtggagagcctaaaatgatgccaacaattgctgaagatcttgaccgccgt
acatttctatacaatcttatcacaccaatcatatctaagtacattcctggtcttgacgaa
ggcaagggaatgtttctcaactttgtaaagtcagaaatgtccaccaccccttgtggctta
ccagtgaggacagtgctcacaagctactacaagagcaagcacttcaagtgccgcacacgc
gatccatggaacgatttcacaagccctgaccaaaccgtcctctgcaacgacgtaaaccag
agcatgcactgccagctcttagcaggcctaatccaacgccacaaagtcctccggctcggc
gctgtcttcgcctccgcattcctcagagccatttccttcctggaaaggaactggcaaagc
ctctgcgatgacattcgcagaggcgagctcagttcctttgtaactgaccctggttgctgc
tctgccatgtcctctgttctttcatcccctaaccctgatcttgcagatgagatttctgaa
atttgcagccacaagtgttggaaggggattttacttaagatttggcctaaggctaagtac
attgaagctgtgatcactgggtccatggctcagtatattcctgctctggagcattatagt
ggtgggaaattgcctttggttgcttctatgtatgcttcctctgagtgttactttggggtc
aatttgaagcctttgagtgatcctgctgatgttgctttcacactcttgcctaacatgtgt
tactttgagttccttcctcttggccagaatgggacactgttgatggactttgaggagggg
catgtccccaatgacaagcttgtggatttgaagaatgttaagcttggttgcttttatgag
attttggtcactacctttgctggtctatataggtaccgcgttggcgatgtgcttcaagtg
gttagattctacaataaagctccacaattccgattcatctgcaggagaaacgttgtgatc
agcattgacagtgacaagaccagtgaagaggacttgcacaagagtgtcactgaggccaaa
aagttgttaaagcctcttgatgctctattagtggattacactagttaccctgatacttca
tcagtaccaggacactacatattgtattgggaaattctgcattgtggctcaaaggggtca
ggggagccacttgatacgaatgttcttcaggaatgttgctctgtagttgaagagcaacta
gactatgtgtataggcatttacgcaatgataagtcaataggaccacttgagatacgtgtg
gtggagccaggaacatttgaggcattgatggacttgagcattagcaatggagcttcagtg
aatcagtacaaaacaccaaggtgcattaagtctagtaaagcattcaatctgctcaattct
agagttaatgcttcctttttcagtcctagagttcccagttggggatctaagctgtgttga
DBGET
integrated database retrieval system