Lotus japonicus: 130718559
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Entry
130718559 CDS
T04348
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130718559
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
130718559
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
ARM_7
Motif
Other DBs
NCBI-GeneID:
130718559
NCBI-ProteinID:
XP_057425149
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Position
5:complement(8855498..8878185)
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AA seq
565 aa
AA seq
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MAIETLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGHLDHRRYPDFSLISQGHYDAALS
CIIITHFHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELFT
SENIAECMKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMT
ADRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFAL
GRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFDF
KNVHHFERSMINAPGPCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGHR
LMSGKATKVDVDPDTQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMA
LLKEKIHSELGIPCHDPANHETICISSTPYVKTEASGTFIQNCLNPNFKFQKCSSVDECD
STLTEKNLMPELQVKNCLNPNFKFQKCSSVDECDSTLTEKNLMPELQVKDERVAEGVLVM
EKTKKAKIVHQDELLLMLGEKKQGV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgaaactctagttcttggtgctggtcaagaggtagggaagagttgcgtggtg
gtgaccatcaacggaaagcgaatcatgttcgattgcggaatgcacatgggccacttggac
caccgtcgataccctgatttctctctcatctctcaaggccattacgacgctgcactctcc
tgcatcatcatcactcactttcacttggaccatgttggagcattggcttacttcaccgaa
gtttgcgggtatcgcggtcctatttacatgacgtacccaactaaagctctagctcctttg
atgttggaagactatcggaaggtaatggttgatcgtcggggtgaggaagagctattcact
tcagaaaatattgcagagtgcatgaagaaagttattgctatagatctgaggcagactgtg
caagtagatgaagacctgcagatacgtgcatattatgcaggacatgttattggagctgca
atgttctatgcaaaagttggagatgcagaaatggtttatacaggagactacaatatgaca
gcagatagacacctcggagcagctcaaatcgatagattacggcttgaccttcttataact
gaatccacgtatgcgactacaatacgtgattcaaaatatgctcgtgagagggaattcctc
aaagccgttcataaatgtgtttctggtggaggaaaggtgcttattccaacatttgctctc
ggtagagctcaggaattatgcattttgttggatgactactgggagcgcatgaatttgaag
gttcctatctatttctcagcaggtttaactattcaagctaatatgtattacaagatgctt
attagttggacaagccagaagattaaagatacatactctacacataatgcatttgatttt
aagaatgttcaccattttgaaaggtctatgataaatgctcctggtccttgtgttctcttt
gccactcctgggatgataagtggtggattttcacttgaagtttttaagcactgggcaccg
tcagaaaataaccttattactttgcctgggtattgtgtagctgggacagtaggacataga
ttaatgtcaggtaaggccaccaaagttgatgtggatcctgatacacaaatagacgtgcgt
tgccagattcatcaattggcttttagtcctcacacagattctaaaggaataatggatctt
gtaaaatttctctccccaaaacatgttatattagtgcatggtgagaagcctaaaatggct
ttgcttaaagagaaaattcattctgagttggggattccgtgtcatgatcctgcaaatcat
gaaaccatatgcatttcctccactccctacgtaaagacagaagcctctggcactttcatt
caaaactgcttgaacccgaacttcaaattccagaaatgcagttcagtggacgaatgtgac
tctactttgacagaaaaaaacttaatgcctgaacttcaagttaaaaactgcttgaatccg
aacttcaagttccagaaatgcagttcagtggatgaatgtgactctactttgacagaaaaa
aacctaatgcctgaacttcaagttaaagatgaaagagtagcagaaggagttctggttatg
gagaaaacaaaaaaggcaaagattgttcaccaggatgaacttctgctcatgttaggtgaa
aagaagcaaggggtttag
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