Lotus japonicus: 130718854
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Entry
130718854 CDS
T04348
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lja
Lotus japonicus
Pathway
lja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130718854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130718854
03110 Chaperones and folding catalysts [BR:
lja03110
]
130718854
03029 Mitochondrial biogenesis [BR:
lja03029
]
130718854
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
130718854
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130718854
Messenger RNA biogenesis [BR:
lja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130718854
Chaperones and folding catalysts [BR:
lja03110
]
Heat shock proteins
HSP60 / Chaperonin
130718854
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130718854
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130718854
Exosomal proteins of other body fluids (saliva and urine)
130718854
Exosomal proteins of breast cancer cells
130718854
Exosomal proteins of colorectal cancer cells
130718854
Exosomal proteins of bladder cancer cells
130718854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
130718854
NCBI-ProteinID:
XP_057425465
LinkDB
All DBs
Position
5:57149055..57153727
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFATSLASKARIARNTSQQIGSRAAWSRNYAAKDIKFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGKTLENELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLIIIHEKKISSINAIVKVLELALKKQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGAQLITEELGMNLEKVDLEMLGSCKKVTISKDD
TVILNGAGDKKSLEERSEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGILPGGGVALLYASNELSKLQTANFDQKIGVQIIQNALKT
PVHTIAANAGVEGAVVVGKLLEQNNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVTEFPKEDKDAPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgctttgccacttcccttgcctccaaagctcggattgctaggaacaccagtcaa
cagattggaagtagggcggcgtggagcaggaattatgcggccaaagacattaaatttggt
gtggaggctcgggctctgatgctgaagggtgttgaagagcttgctgatgcagtcaaagta
accatgggccctaagggccgcaatgtggtgattgagcaaagttatggtgcccctaaagtg
acaaaagatggagtaactgttgccaagagcattgaattcaaggatagagtcaagaatgta
ggtgccagtcttgtaaagcaggttgcaaatgccaccaatgatgtggctggtgatggaacc
acatgtgctactgtccttactcgagcaatatttgcggaaggttgcaaatcagttgcagct
ggtatgaatgcaatggacctgaggcgaggtattaatatggctgttgattctgtggtcaca
aacctgaagagcagagcacgaatgattagcacttctgaagaaatagctcaggttgggaca
atatctgctaatggggagagagagattggtgaattaattgcaaaagctatggagaaagtt
ggcaaagaaggtgtaatcacgattgcagatggcaagacattggaaaatgagttggaagtt
gttgaaggcatgaagcttgacaggggctacatttctccatatttcataactaaccagaag
aaccagaaatgtgaacttgaagatcctctcattataatccatgagaagaaaatctcgagt
ataaatgccatagttaaagtactagagttagcattgaagaaacaaagacctttattgatt
gtggcagaggatgtggaaagtgatgcccttgcaactcttattctaaataagcttcgtgct
ggaatcaaggtatgtgccatcaaagcccctggttttggtgaaaatcgaaaatctggtctc
caggatcttgccgttcttaccggagctcagcttatcactgaagagcttggcatgaatctt
gaaaaagtggatctggagatgcttggctcttgcaaaaaggtcactatttccaaagacgac
actgtcattcttaatggagctggtgataagaaatcacttgaggaaagatctgagcagatt
aggtctgcaattgaaaatagcacttcagattatgacaaggaaaagttacaagaaagatta
gccaagctttctgggggtgttgcagtgcttaagatcggaggagccagtgaggctgaagtt
agtgagaagaaggatagagtgacagatgccttaaatgcaactaaggcagctgtagaggag
ggcatattacctggtggtggtgttgctcttctgtatgcatctaatgagttgagtaagctt
caaactgccaactttgatcaaaagataggtgtccagattatccaaaatgctttgaagaca
cctgtgcacacaattgccgcaaatgctggagttgagggggctgttgtcgtcggtaaatta
ttggaacaaaataatcctgatcttgggtatgatgccgccaaaggtgaatatgttgatatg
gttaaatctggaataattgatccattgaaggtgattaggaccgcacttgttgatgcagcc
agtgtgtcttctttgatgacaacaactgaagcaattgtgaccgaatttccaaaggaagat
aaagatgctcctgctatgggtggtggcatgggtggcatggattattag
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