Lotus japonicus: 130719963
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Entry
130719963 CDS
T04348
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130719963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130719963
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130719963
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
130719963
NCBI-ProteinID:
XP_057426535
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Position
5:complement(62715416..62722265)
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AA seq
876 aa
AA seq
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MEAAIDVLPPKRPAPSGISPQGHKRLKLSSDSLPYSAHDKSVPEAPANVEDFSNPFAISD
FLNRLEIGKFGSVTKDIEALITRKMQVLGPFFAKFPKLVTQSLKVVVNHDEESNKLENKK
GTIMSHDKVIDLEEERTKKDASSAQAVVIIDSDEEDDRDKNSSLPFNEVMFPNSLQSPAL
RMMGYRAPIAYHGESEDLKFEPTRAAKDKTQRDKGVYVGVQEEDEVDTEDDGLDDIWREM
SMAVECSKDASVNPPPEEEVEKEDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKV
KRSTRTYMADSWNAKAKVDVYGVNIAEDDIMFTEISAHPRHMKQMKSHQIEGFNFLVRNL
VGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVE
DIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILL
KVPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL
RMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVIQDLREMTSKVLHYYK
GDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKVSSMGSALYLHPRLIPVADKCG
ENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLCESSNEKLLVFSQYLLPLKYLERLVMK
WKGWSFGKEIFGISGESSSEQREWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLIL
DVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITCFKKELISKMWFEWNEY
CGDRAFQVETVSVNECGDEFLETPMLGEDVKALYKR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcaattgatgtgttaccacctaaacgccccgccccaagtggaatttctccc
cagggacataaaagactgaaactatctagtgatagtctgccatactcagcacatgataaa
tctgtaccagaggcacctgcaaatgttgaagacttcagcaatccatttgcgatctctgat
tttttaaatcgtttagaaattggaaaatttggaagtgtcacaaaggacatagaggccctt
ataacccgaaaaatgcaagtactgggccctttctttgcaaagtttcctaaacttgttact
caatcattaaaagtggttgtgaaccacgatgaagaaagtaataagttggaaaataaaaaa
ggcaccatcatgtcacatgataaagtaatagatttggaagaggagcgcactaaaaaggat
gcttcttcagcacaggctgttgtgattattgattcggatgaggaagatgatagggacaaa
aattcttctcttccatttaatgaagttatgtttccgaactcactccaatctcctgcattg
aggatgatggggtatcgtgctcccattgcttaccatggagaaagtgaagatctcaaattt
gagccaactcgagctgctaaagataagactcagagagataaaggtgtttatgttggtgta
caggaggaagatgaggttgatactgaagatgatggacttgatgatatttggagggaaatg
tcaatggccgtagaatgttcgaaggatgcttctgtgaatcctccacctgaggaagaagtt
gaaaaagaagacgactgtgatcattcttttgttttaaaagatgatcttggttatgtttgt
cgtgtttgtggtgtcattgaccgaggaattgaaaccatatttgagttccagtacaaggtt
aaaaggagcacaagaacttacatggctgattcatggaatgccaaagcaaaagttgatgta
tatggagttaatattgccgaagatgacatcatgtttactgaaatttcagcacatcctagg
catatgaagcaaatgaagtctcatcaaattgaagggttcaattttctcgtcagaaacctc
gtaggtgacaatcctgggggctgcatcttggcccatgctccaggatctgggaagacattc
atgataatcagtttcatgcagagttttctaggaaagtacccaaatgctagacctctggtg
gtgcttcccaagggaatactatctacttggaaaaaggagtttcagacatggcaagtggag
gacataccactttacgatttttacactgtgaaggcagacagtagatcacagcagttggaa
gttttgaaacaatgggtggaatgcaagagcatccttttcttgggctacaagcagttctct
tcaattgtctgtgataatagtactaacagcatatcaatatcttgccaagatatattgctt
aaggtaccttcaattctcattttagatgaaggacataatccgcggaatgagaataccgat
atggtgcaatcccttgcaaaggtaaaaacacctagaaaagttgtactgtcaggtaccttg
tatcaaaaccatgtgaaggaggtatttaatattttgaatctggttcggccaaagtttctt
aggatggaaacatctaggcctattgtcaagcgcattcacagtagagtacatatatcgggc
aagaaatctttctatgatttggtggaggacactttgcagaaggacccagatttcaaaagg
aaaatagctgttattcaagatttgcgtgagatgacgagtaaggtacttcactattacaaa
ggagattttcttgatgagcttcctggtctggttgattttactgtgttgcttaagctgacc
ccaagacagaagcatgaaactgggaaattaaagaatatatctagaaagttcaaggtatct
tctatgggcagtgcgctgtatcttcaccctagattgatacctgttgcggataaatgtggt
gaaaactctgtatctgaccaaatggtggatgatttaatagagaagttggatgtgaaagat
ggagtgaagtcgaaattctttatgaacattctaaacttgtgtgaatcatccaacgagaag
cttctagtgttcagccaatatctcttacctttgaaatatttagagaggttagttatgaaa
tggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctctgag
caaagggagtggtccatgaacaaattcaacaattcgcctgatgctaaaatcttctttggc
tcaatcaaggcttgtggagagggcatatcattggttggggcatcccgagtactcattttg
gatgttcatctgaacccatcagttactcgtcaagctattggtcgtgcattccgaccagga
cagacaaagaaggtctttgtgtatcgattgatagctgctgattctccggaagaggacgat
cacattacttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatgagtac
tgtggtgatagagccttccaagttgagaccgttagtgtcaatgaatgtggtgatgagttc
cttgagactccaatgttaggagaagatgtaaaagctttgtataaaaggtaa
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